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5' Flanking sequence (upstream):
*
(Maximum of 1000000)
3' Flanking sequence (downstream):
*
(Maximum of 1000000)
Number of base pairs per row:
30 bps
45 bps
60 bps
75 bps
90 bps
105 bps
120 bps
135 bps
150 bps
165 bps
180 bps
Additional exons to display:
No exon markup
Ab-initio exons
Core exons
EST gene exons
Orientation of additional exons:
Display same orientation exons only
Display reverse orientation exons only
Display exons in both orientations
Show variants:
No
Yes
Yes and show links
Hide variants longer than 10bp:
Filter variants by consequence type:
No filter
3 prime UTR variant
5 prime UTR variant
NMD transcript variant
coding sequence variant
coding transcript variant
downstream gene variant
frameshift variant
incomplete terminal codon variant
inframe deletion
inframe insertion
intron variant
mature miRNA variant
missense variant
non coding transcript exon variant
non coding transcript variant
protein altering variant
splice acceptor variant
splice donor 5th base variant
splice donor region variant
splice donor variant
splice polypyrimidine tract variant
splice region variant
start lost
start retained variant
stop gained
stop lost
stop retained variant
synonymous variant
transcript ablation
transcript amplification
upstream gene variant
Filter variants by evidence status:
No filter
1000Genomes
Cited
ESP
ExAC
Frequency
HapMap
Multiple_observations
Phenotype_or_Disease
TOPMed
gnomAD
Hide individual variant sources:
No filter
Hide HapMap2
Hide Panzea_2.7GBS
Line numbering:
Relative to this sequence
Relative to coordinate systems
None
Display pop-up information on mouseover:
Yes
No
Fields marked
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are required
