/* This documents the processing of TIGR v4 rice genome - SSR alignments for Cornell and IRMI SSRs Sharon Wei */ The 17,010 SSR primers are from gramene markers database. The SSRs are aligned to TIGR Genomic assembly v4 using e-PCR. e-PCR was run with setting s of 180-bp margin and 0 allowed mismatches, resulting in 15087 matches. The matches are from 14,611 unique primers (85.9% of the total 17,010).