QTL Accession ID | AQQ010 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||||
Trait Symbol | TINB | ||||||||||
Trait Name | tiller number | ||||||||||
Published Symbol | tp7 | ||||||||||
Trait Synonym(s) |
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Trait Category | Vigor | ||||||||||
Chromosome | 7 | ||||||||||
Comments |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 7,232,181-16,874,331 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNHZAU Zh97/Ming63 RI QTL 2002 | BNL6.32 | 7 | 51.5-59.5 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQQ010 | 7 | 51.5 | 59.5 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | C1023 | RFLP | Oryza sativa | qtl_marker |
To | R1440 | RFLP | Oryza sativa | qtl_marker |
To | e11k3 | RFLP | Oryza sativa | qtl_marker |
To | RG678 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000346) | Xing-Z et al., 2002 (IAGP) |
Plant Structure | (PO:0005001) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007073) | Gramene curators, 2007 (IC) |
Growth Stage | (GRO:0007049) | Gramene curators, 2007 (IC) |
Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Xing-Z et al., 2002 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr7 | 7,232,181 | 16,874,331 | ~160K SNPs x 20 accessions (McNally 2... | 1,406 | Search for SNPs |
chr7 | 7,232,181 | 16,874,331 | '1536 chip' - 1311 SNPs x 395 rice ac... | 16 | Search for SNPs |
chr7 | 7,232,181 | 16,874,331 | Huang X, et al, Nat Genetics 2010 Nov... | 24,701 | Search for SNPs |
chr7 | 7,232,181 | 16,874,331 | RiceDiversity 44K SNP assay, 34 trait... | 24,701 | Search for SNPs |
chr7 | 7,232,181 | 16,874,331 | RiceDiversity 44K SNP assay, 34 trait... | 475 | Search for SNPs |