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Oryza sativa QTL "AQFV010" (seedling vigor)
| QTL Accession ID | AQFV010 |
|---|---|
| Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
| Trait Symbol | SDLVIG |
| Trait Name | seedling vigor |
| Published Symbol | qSV-3-2 |
| Trait Synonym(s) | |
| Trait Category | Vigor |
| Chromosome | 3 |
| Comments | Shoot length (SL) was measured to evaluate seedling vigor at temperature 20C condition and used for QTL analysis. |
Map Positions (2)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 34,925,198-34,925,301 bp | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 3 | 286.2-301 cM | View Comparative Map | |||
|
||||||||
QTL DB Map Position (1)
| Name | Chromosome | Start | Stop |
|---|---|---|---|
| AQFV010 | 3 | 286.2 | 301 |
Associated Markers (3)
| Direction | Name | Type | Species | Assoc. Type |
|---|---|---|---|---|
| To | RM227 | SSR | Oryza sativa Indica Group | qtl_marker |
| To | RM85 | SSR | Oryza sativa Indica Group | qtl_marker |
| To | G249 | RFLP | Oryza sativa | qtl_marker |
Associated Genes (0)
Associated Ontologies (6)
| Term Type | Term | Evidence |
|---|---|---|
| Trait Ontology | (TO:0000280) | Zhang-Z-H et al., 2005 (IAGP) |
| Plant Structure | (PO:0009003) | Gramene curators, 2007 (IC) |
| Plant Growth and Development Stage | (PO:0007131) | Gramene curators, 2007 (IC) |
| Growth Stage | (GRO:0007043) | Gramene curators, 2007 (IC) |
| Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
| Species Ontology | (GR_tax:013681) | Zhang-Z-H et al., 2005 (SM) |
Database Cross-References (1)
SNPs (0)
