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Oryza sativa QTL "AQF071" (anther length)
| QTL Accession ID | AQF071 |
|---|---|
| Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
| Trait Symbol | ANTLG |
| Trait Name | anther length |
| Published Symbol | |
| Trait Synonym(s) | |
| Trait Category | Anatomy |
| Chromosome | 9 |
| Comments | Related with life-history trait. |
Map Positions (2)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 15,322,119-22,504,901 bp | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| QTL | JNIG W1944/Peik QTL 2002 | BNL6.32 | 9 | 225.4-275.4 cM | View Comparative Map | |||
|
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QTL DB Map Position (1)
| Name | Chromosome | Start | Stop |
|---|---|---|---|
| AQF071 | 9 | 225.4 | 275.4 |
Associated Markers (4)
| Direction | Name | Type | Species | Assoc. Type |
|---|---|---|---|---|
| To | G385 | RFLP | Oryza sativa | qtl_marker |
| To | RZ792 | RFLP | Oryza sativa | qtl_marker |
| To | G103 | RFLP | Oryza sativa | qtl_marker |
| To | C506 | RFLP | Oryza sativa | qtl_marker |
Associated Genes (0)
Associated Ontologies (8)
| Term Type | Term | Evidence |
|---|---|---|
| Trait Ontology | (TO:0000531) | Cai-W et al., 2002 (IAGP) |
| Plant Structure | (PO:0009066) | Cai-W et al., 2002 (SM) |
| Plant Growth and Development Stage | (PO:0007016) | Cai-W et al., 2002 (SM) |
| (PO:0007130 ) | Cai-W et al., 2002 (SM) | |
| Growth Stage | (GRO:0007151) | Cai-W et al., 2002 (SM) |
| (GRO:0007140) | Cai-W et al., 2002 (SM) | |
| Environment | (EO:0007403) | Gramene curators, 2007 (IC) |
| Species Ontology | (GR_tax:013681) | Cai-W et al., 2002 (SM) |
Database Cross-References (1)
SNPs (36,688)
| Chr | Start | Stop | Exp | Num. SNP Positions | |
|---|---|---|---|---|---|
| chr9 | 15,322,119 | 22,504,901 | ~160K SNPs x 20 accessions (McNally 2... | 3,309 | Search for SNPs |
| chr9 | 15,322,119 | 22,504,901 | '1536 chip' - 1311 SNPs x 395 rice ac... | 31 | Search for SNPs |
| chr9 | 15,322,119 | 22,504,901 | Huang X, et al, Nat Genetics 2010 Nov... | 16,314 | Search for SNPs |
| chr9 | 15,322,119 | 22,504,901 | RiceDiversity 44K SNP assay, 34 trait... | 16,314 | Search for SNPs |
| chr9 | 15,322,119 | 22,504,901 | RiceDiversity 44K SNP assay, 34 trait... | 720 | Search for SNPs |
