QTL Accession ID | AQEN062 | ||||||
---|---|---|---|---|---|---|---|
Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
Trait Symbol | BLRS | ||||||
Trait Name | blast disease resistance | ||||||
Published Symbol | |||||||
Trait Synonym(s) |
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Trait Category | Biotic stress | ||||||
Chromosome | 4 | ||||||
Comments | Diseased leaf area in the field experiment at Cavinti, Philippines, was measured to evaluate leaf blast resistance and used for QTL analysis. |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 31,662,839-31,663,326 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | IRRI Mor/CO39 QTL 1994 | BNL6.32 | 4 | 11.2-11.2 cM | View Comparative Map | |||
|
Name | Chromosome | Start | Stop |
---|---|---|---|
AQEN062 | 4 | 11.2 | 11.2 |
Direction | Name | Type | Species | Assoc. Type |
---|---|---|---|---|
To | RG214 | RFLP | Oryza sativa | qtl_marker |
To | RG620 | RFLP | Oryza sativa | qtl_marker |
To | RG476 | RFLP | Oryza sativa | qtl_marker |
Term Type | Term | Evidence |
---|---|---|
Trait Ontology | (TO:0000074) | Wang-G-L et al., 1994 (IAGP) |
Plant Structure | (PO:0009025) | Gramene curators, 2007 (IC) |
Plant Growth and Development Stage | (PO:0007130) | Gramene curators, 2007 (IC) |
(PO:0007134) | Gramene curators, 2007 (IC) | |
Growth Stage | (GRO:0007139) | Gramene curators, 2007 (IC) |
Environment | (EO:0007218) | Gramene curators, 2007 (IC) |
Species Ontology | (GR_tax:013681) | Wang-G-L et al., 1994 (SM) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr4 | 31,662,839 | 31,663,326 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr4 | 31,662,839 | 31,663,326 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr4 | 31,662,839 | 31,663,326 | Huang X, et al, Nat Genetics 2010 Nov... | 6 | Search for SNPs |
chr4 | 31,662,839 | 31,663,326 | RiceDiversity 44K SNP assay, 34 trait... | 6 | Search for SNPs |
chr4 | 31,662,839 | 31,663,326 | RiceDiversity 44K SNP assay, 34 trait... | 0 |