Oryza sativa QTL "AQCD005" (alkali digestion)

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QTL Accession ID

AQCD005

Species

Oryza sativa (Rice) [ GR_tax:013681 ]

Trait Symbol

ALKDIG

Trait Name

alkali digestion

Published Symbol

qASV9

Trait Synonym(s)

ASS	alkali spreading score
alkali spreading value	alkali-spread score

Trait Category

Chromosome

Comments

The alkali spreading value (ASV) was measured to evaluate gelatinization temperature (GT) and used for QTL analysis.

Map Positions (1)

Oryza sativa (1)

Map Type

Map Set

Name

Map

Position

Ext. Links

QTL

BNL6.32

44.7-55.3 cM

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Details

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QTL DB Map Position (1)

Name	Chromosome	Start	Stop
AQCD005	9	44.7	55.3

Associated Markers (3)

Direction	Name	Type	Species	Assoc. Type
To	RM328	SSR	Oryza sativa Indica Group	qtl_marker
To	RM105	SSR	Oryza sativa Japonica Group	qtl_marker
To	RM219	SSR	Oryza sativa Indica Group	qtl_marker

Associated Genes (0)

Associated Ontologies (8)

Term Type	Term	Evidence
Trait Ontology	(TO:0000134)	Yan-C-J et al., 2001 (IAGP)
Plant Structure	(PO:0000003)	Gramene curators, 2007 (IC)
	(PO:0009011)	Gramene curators, 2007 (IC)
Plant Growth and Development Stage	(PO:0007033)	Gramene curators, 2007 (IC)
	(PO:0009012)	Gramene curators, 2007 (IC)
Growth Stage	(GRO:0007001)	Gramene curators, 2007 (IC)
Environment	(EO:0007403)	Gramene curators, 2007 (IC)
Species Ontology	(GR_tax:013681)	Yan-C-J et al., 2001 (SM)

Database Cross-References (1)

Gramene Literature	Yan-C-J, Xu-C-W, Yi-C-D, Liang-G-H, Zhu-L-H, Gu-M-H, "Genetic analysis of gelatinization temperature in rice via microsatellite (SSR) markers.", Acta genetica Sinica, 2001, vol. 28(11), pp. 1006-1011

SNPs (0)