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Oryza sativa Japonica Group SSR "RM1167"
| ID | 12311 | ||
|---|---|---|---|
| Name | RM1167 | ||
| Synonyms (2) |
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| Type | SSR | ||
| Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] | ||
| Germplasm | |||
| Description | |||
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | RM1167 |
| Repeat Motif | (AG)13 |
| Anneal Temperature | 55 |
| Expected PCR Product Size | 180 |
| Sequence Source | AY017842 |
| Linkage Group | |
| Remarks |
Database Cross-References (2)
Sequences (4)
Related Sequences (4)
Align All Sequences
Map Positions (4)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 4,239,057-4,239,450 bp | View Comparative Map | |||
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| BNL6.32 | Chr. 1 | 4,239,164-4,239,343 bp | View Comparative Map | |||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | IRMI 2003 | BNL6.32 | 1 | 22.6-22.6 cM | View Comparative Map | |||
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| QTL | CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 1 | 0-0 cM | View Comparative Map | |||
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Associations (10)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Oryza sativa | QTL | AQEI099 | qtl_marker |
| Oryza sativa | QTL | AQEI100 | qtl_marker |
| Oryza sativa | QTL | AQFJ017 | qtl_marker |
| Oryza sativa | QTL | AQFJ034 | qtl_marker |
| Oryza sativa | QTL | AQFJ051 | qtl_marker |
| Oryza sativa Japonica Group | SSR | AUT10248 | equivalent_to |
| Oryza sativa Japonica Group | Primer | MRG0167.HAU0167_forward | primer_forward |
| Oryza sativa Japonica Group | Primer | MRG0167.HAU0167_reverse | primer_reverse |
| Oryza sativa | Genomic DNA | AY017842 | contained_in_sequence |
| Oryza sativa | Genomic DNA | AY017842 | source_sequence |
Associated Ontologies (0)
Images (0)
