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Oryza sativa Japonica Group SSR "RM116"
| ID | 10993 |
|---|---|
| Name | RM116 |
| Synonyms (0) | None. |
| Type | SSR |
| Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
| Germplasm | |
| Description | |
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | RM116 |
| Repeat Motif | (CT)9 |
| Anneal Temperature | 55 |
| Expected PCR Product Size | 258 |
| Sequence Source | D23967 |
| Linkage Group | |
| Remarks |
Database Cross-References (2)
Sequences (3)
Related Sequences (3)
Align All Sequences
Map Positions (5)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 5,740,926-5,741,204 bp | View Comparative Map | |||
|
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | CIAT SSR 2006 | BNL6.32 | 11 | 26.5-26.5 cM | View Comparative Map | |||
|
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| IRMI 2003 | BNL6.32 | 11 | 30.5-30.5 cM | View Comparative Map | ||||
|
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| QTL | CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 11 | 34.7-34.7 cM | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 2001 | BNL6.32 | 11 | 41.5-41.5 cM | View Comparative Map | |||
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Associations (3)
| Species | Type | Name | Assoc. Type |
|---|---|---|---|
| Oryza sativa Japonica Group | Primer | RM116_forward | primer_forward |
| Oryza sativa Japonica Group | Primer | RM116_reverse | primer_reverse |
| Oryza sativa Japonica Group | EST | D23967 | source_sequence |
Associated Ontologies (0)
Images (0)
