Oryza sativa gene "ZIP6" (GR:0101276)

Genes

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Oryza sativa gene "ZIP6" (GR:0101276)

Species

Oryza sativa (Rice) [ GR_tax:013681 ]

Accession

GR:0101276

Gene Symbol

ZIP6

Gene Name

Zinc-regulated transporter 6

Synonyms (3)

OsZIP6	OsZIP6
LOC_Os05g07210

E.C. Numbers (0)

Pathway Reactions (0)

Chromosome No.

Gene Type

CDS (Protein coding)

Has Phenotype

Description

The gene encodes for a membrane localized zinc ion (Zn2+) transporter.

Curator Comment

Zinc is an essential nutrient for plants.

Alleles (1)

ZIP6

Germplasm (1)

Nipponbare

Sequences (5)

Protein

Gramene Protein:

A2Y0R2, Q6L8F9

Nucleotide (DNA)

GenBank Nucleotide:	AB126088
Rice Ensembl Gene:	LOC_Os05g07210
IRGSP Gene:	Os05g0164800

Gene-To-Gene Interactions (0)

Gene Interactions (0)

Map Positions (1)

Oryza sativa Japonica Group (1)

Map Type

Map Set

Name

Map

Position

Ext. Links

Sequence

Gramene Annotated Nipponbare Sequence 2009

BNL6.32

Chr. 5

3,807,951-3,810,783bp

View Comparative Map

Details

CMap Preview

Gene Map Positions (1)

Map Position [ View in Marker DB ]
#	Map Set Name	Linkage Group	Start Position	Stop Position	CMap Feature Acc
1	Rice japonica MSU6	Chr. 5	3807951 bp	3810783 bp	grjp2009a-5-GR:0101276

Associated Ontologies (9)

Cellular Component	membrane (GO:0016020), integral to membrane (GO:0016021)
Molecular Function	zinc ion transmembrane transporter activity (GO:0005385), zinc ion binding (GO:0008270), metal ion transmembrane transporter activity (GO:0046873)
Biological Process	zinc ion transport (GO:0006829), metal ion transport (GO:0030001)
Environment	Magnaporthe grisea (EO:0007226), unknown environment (EO:0007403)

Associated QTL (0)

Database Cross-References (0)

Literature (1)

Ishimaru-Y, Suzuki-M, Kobayashi-T, Takahashi-M, Nakanishi-H, Mori-S, Nishizawa-N-K., "OsZIP4, a novel zinc-regulated zinc transporter in rice", Journal of experimental botany, 2005, vol. 56, pp. 3207-3214

Images (0)

SNPs (4)

Chr	Start	Stop	Exp	Num. SNP Positions
chr5	3,807,951	3,810,783	~160K SNPs x 20 accessions (McNally 2...	1	Search for SNPs
chr5	3,807,951	3,810,783	'1536 chip' - 1311 SNPs x 395 rice ac...	0
chr5	3,807,951	3,810,783	Huang X, et al, Nat Genetics 2010 Nov...	1	Search for SNPs
chr5	3,807,951	3,810,783	RiceDiversity 44K SNP assay, 34 trait...	1	Search for SNPs
chr5	3,807,951	3,810,783	RiceDiversity 44K SNP assay, 34 trait...	1	Search for SNPs