Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0101258 | ||
Gene Symbol | TatC | ||
Gene Name | Sec-independent protein translocase subunit C | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (0) | |||
Chromosome No. | 1 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | yes | ||
Description | It is a single copy gene and is a homolg of Arabidopsis thaliana gene APG2 (ALBINO AND PALE GREEN 2; AT2G01110). A Tos17 mutant line (ND5664) revealed a pale green shoot and leaves, significant reduction in total chlorophyll, chlorophyll-a and chlorophyll-b contents, increased water loss from detached leaves and a basal level of abscisic acid (ABA) accumulation, compared to rapid accumulation of ABA after 30 min of drought treatment in wild type plants. The transcripts were highly expressed in the leaf and shoot at the seedling stage in the wild type plants. It was not expressed in mutant plants. | ||
Curator Comment | This gene was named TatC by the authors Agrawal et al. (2001) based on its similarity to E. coli gene TatC, which is known for its function as sec-independent protein translocase protein C. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 17,340,156-17,345,359bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 1 | 17340156 bp | 17345359 bp | grjp2009a-1-GR:0101258 |
Trait | chlorophyll-a content (TO:0000293), chlorophyll-b content (TO:0000295), drought related trait (TO:0000394), abscisic acid concentration (TO:0000478), chlorophyll content (TO:0000495) |
Plant Structure | shoot system (PO:0009006), vascular leaf (PO:0009025) |
Cereal Plant Growth Stage | 1-4 leaf stage (GRO:0007142) |
Cellular Component | plastid (GO:0009536), membrane (GO:0016020) |
Molecular Function | protein transporter activity (GO:0008565), P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450) |
Biological Process | protein secretion (GO:0009306), abscisic acid biosynthetic process (GO:0009688) |
Environment | Magnaporthe grisea (EO:0007226), unknown environment (EO:0007403), drought environment (EO:0007404) |