Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0101184 | ||
Gene Symbol | Scamp1 | ||
Gene Name | Secretory carrier membrane protein 1 | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (0) | |||
Chromosome No. | 7 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | no | ||
Description | Secretory carrier membrane proteins (SCAMPs) are ubiquitous components of recycling vesicles that shuttle between the plasma membrane, early endosomes, and the trans-Golgi complex. They play a role in clathrin mediated endocytosis process by involving the recruitment of clathrin coats to the plasma membrane and the trans-Golgi network. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 22,626,703-22,631,264bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 7 | 22626703 bp | 22631264 bp | grjp2009a-7-GR:0101184 |
Cellular Component | early endosome (GO:0005769), plasma membrane (GO:0005886), membrane (GO:0016020) |
Biological Process | endocytosis (GO:0006897), receptor-mediated endocytosis (GO:0006898) |
Environment | tissue culture growth media (EO:0007266), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr7 | 22,626,703 | 22,631,264 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr7 | 22,626,703 | 22,631,264 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr7 | 22,626,703 | 22,631,264 | Huang X, et al, Nat Genetics 2010 Nov... | 4 | Search for SNPs |
chr7 | 22,626,703 | 22,631,264 | RiceDiversity 44K SNP assay, 34 trait... | 4 | Search for SNPs |
chr7 | 22,626,703 | 22,631,264 | RiceDiversity 44K SNP assay, 34 trait... | 0 |