Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0080029 | ||
Gene Symbol | DOS | ||
Gene Name | delay of the onset of senescence | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (0) | |||
Chromosome No. | 1 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | yes | ||
Description | OsDOS encodes a nuclear-localized CCCH-type zinc finger protein, which is involved in delaying leaf senescence in rice. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 4,948,047-4,950,126bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 1 | 4948047 bp | 4950126 bp | grjp2009a-1-GR:0080029 |
Trait | panicle length (TO:0000040), plant height (TO:0000207), root length (TO:0000227), leaf senescence (TO:0000249), leaf lamina color (TO:0000299), filled grain number (TO:0000447), seed set percent (TO:0000455), chlorophyll content (TO:0000495), flowering time (TO:0002616) |
Plant Structure | vascular leaf primordium (PO:0000017), shoot meristem (PO:0006079), vascular leaf (PO:0009025), inflorescence (PO:0009049) |
Cereal Plant Growth Stage | 07-linear grain-filling (GRO:0007029), 5.2-late booting stage (GRO:0007150) |
Cellular Component | nucleus (GO:0005634) |
Molecular Function | nucleic acid binding (GO:0003676), zinc ion binding (GO:0008270) |
Biological Process | jasmonic acid mediated signaling pathway (GO:0009867), leaf senescence (GO:0010150) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr1 | 4,948,047 | 4,950,126 | ~160K SNPs x 20 accessions (McNally 2... | 2 | Search for SNPs |
chr1 | 4,948,047 | 4,950,126 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr1 | 4,948,047 | 4,950,126 | Huang X, et al, Nat Genetics 2010 Nov... | 2 | Search for SNPs |
chr1 | 4,948,047 | 4,950,126 | RiceDiversity 44K SNP assay, 34 trait... | 2 | Search for SNPs |
chr1 | 4,948,047 | 4,950,126 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |