Species | Oryza sativa (Rice) [ GR_tax:013681 ] |
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Accession | GR:0080018 |
Gene Symbol | BLE3 |
Gene Name | OsBLE3 |
Synonyms (1) | LOC_Os05g15630 |
E.C. Numbers (0) | |
Pathway Reactions (0) | |
Chromosome No. | 5 |
Gene Type | CDS (Protein coding) |
Has Phenotype | yes |
Description | OsBLE3 is a brassinolide-enhanced gene. It was mainly expressed in roots and leaf sheaths with levels of expression directly dependent on the dose of BL. In situ hybridization detected OsBLE3 mRNA in shoot apical meristem, root primordia and vascular tissue. Its expression was enhanced by co-treatment with Brassinolide and low concentration of IAA. The growth of some anti-sense plants showed semi-dwarfism, shorter root length and less branching. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 8,846,514-8,848,601bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 5 | 50.2-53.5cM | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | JRGP RFLP 2000 | 5 | 50.2 cM | 53.5 cM | jrgp-rflp-2000-5_GR:0080018 |
2 | Rice japonica MSU6 | Chr. 5 | 8846514 bp | 8848601 bp | grjp2009a-5-GR:0080018 |
Trait | root number (TO:0000084), internode length (TO:0000145), leaf angle (TO:0000206), plant height (TO:0000207), root length (TO:0000227) |
Plant Structure | root (PO:0009005), portion of vascular tissue (PO:0009015), leaf sheath (PO:0020104), stem internode (PO:0020142), shoot apical meristem (PO:0020148) |
Plant Growth and Development Stage | stem elongation stage (PO:0007089) |
Cereal Plant Growth Stage | 04-stem elongation stage (GRO:0007048) |
Cellular Component | membrane (GO:0016020) |
Molecular Function | catalytic activity (GO:0003824) |
Biological Process | response to brassinosteroid stimulus (GO:0009741), unidimensional cell growth (GO:0009826) |
Environment | auxin regimen (EO:0007074), salt regimen (EO:0007185), unknown environment (EO:0007403), brassinosteroid (EO:0007409) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr5 | 8,846,514 | 8,848,601 | ~160K SNPs x 20 accessions (McNally 2... | 7 | Search for SNPs |
chr5 | 8,846,514 | 8,848,601 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr5 | 8,846,514 | 8,848,601 | Huang X, et al, Nat Genetics 2010 Nov... | 3 | Search for SNPs |
chr5 | 8,846,514 | 8,848,601 | RiceDiversity 44K SNP assay, 34 trait... | 3 | Search for SNPs |
chr5 | 8,846,514 | 8,848,601 | RiceDiversity 44K SNP assay, 34 trait... | 2 | Search for SNPs |