suggestions go here
Genes
Search
Quick Search
Genomes/Ensembl
Markers/Sequences
Comparative Maps
QTL
Diversity
Genes
Germplasm
Proteins
Pathways
Plant Reactome (beta)
Ontologies
Literature
BLAST
Gramene Mart
Genomes
Arabidopsis lyrata
Arabidopsis thaliana
Brachypodium distachyon
Brassica rapa
Chlamydomonas reinhardtii
Cyanidioschyzon merolae (red algae)
Glycine max (soybean)
Hordeum vulgare (Barley)
Leersia perrieri (chr 3S)
Musa acuminata (Banana)
Medicago truncatula
Oryza barthii
Oryza brachyantha
Oryza glaberrima
Oryza glumaepatula (chr 3S)
Oryza granulata (chr 3S)
Oryza longistaminata (chr 3S)
Oryza meridionalis (chr 3S)
Oryza minutaBB (chr 3S)
Oryza minutaCC (chr 3S)
Oryza nivara (chr 3S)
Oryza officinalis (chr 3S)
Oryza punctata
Oryza rufipogon (chr 3S)
Oryza rufipogon (FPC map)
Oryza sativa Indica Group
Oryza sativa (rice)
Physcomitrella patens
Populus trichocarpa (poplar)
Selaginella moellendorffii
Setaria italica (foxtail millet)
Solanum lycopersicum (tomato)
Solanum tuberosum (Potato)
Sorghum bicolor
Vitis vinifera (grape)
Zea mays
Triticum aestivum (bread wheat)
Aegilops tauschii (wheat D-genome)
Triticum urartu (wheat A-genome progenitor)
Organelles
Species
Barley (Hordeum)
Brachypodium
Foxtail Millet (Setaria)
Maize (Zea)
Oats (Avena)
Pearl Millet (Pennisetum)
Rice (Oryza)
Rye (Secale)
Sorghum (Sorghum)
Wheat (Triticum)
Wild Rice (Zizania)
Other Oryza
Download
Download Index
FTP Site
Resources
Links Pages
Submit a Term
Newsletters
Web Services
Gene Nomenclature
About
Contact Us
About Us
Outreach Program
Brochure
Advisory Board
Collaborators
Gramene Newsletter
Cite Gramene
Help
Site Map
Help Documents
Release Notes
Tutorials and Exercises
Glossary
FAQs
Gramene Documentation
Workshop Materials
Mailing Lists
Ask Us
Feedback
Gene Home
|
Search
| |
Submit
|
Help
|
Tutorial
|
FAQ
|
Release Notes
Browse Ontology Database by:
Trait
|
Plant Structure
|
Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
Gramene Protein Accession
All Fields
Type:
Not sequenced
CDS (Protein coding)
rRNA (Ribosomal RNA)
tRNA (Transfer RNA)
Pseudogene (non-functional)
Not classified
miRNA (MicroRNA)
siRNA (Small interfering RNA)
Sequenced Gene Loci
All Gene Types
Species:
Aegilops
Aegilops x Triticum
Agropyron
Avena (Oat)
Dasypyrum
Elymus (Wild rye)
Hordeum (Barley)
Lophopyrum
Oryza sativa (Rice)
Phalaris
Secale
Sorghum bicolor (Sorghum)
Thinopyrum
Triticum
Zea mays subsp. mays (Maize)
All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
view help
Oryza sativa gene "TSV1" (GR:0060970)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060970
Gene Symbol
TSV1
Gene Name
RICE TUNGRO SPHERICAL VIRUS RESISTANCE 1
Synonyms (5)
RTSV
tsv1
rice tungro spherical virus resistance-1
tsv1
rice tungro spherical virus resistance-1
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
4
Gene Type
Not sequenced
Has Phenotype
yes
Description
under curation
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell SSR 2001
BNL6.32
4
27.1-36.1cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
4
3.1-12.1cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 2001
4
3.1 cM
12.1 cM
cu-sl-2001-4-ip8
2
Cornell SSR 2001
4
27.1 cM
36.1 cM
cu-dh-2001-4-ip4
Associated Ontologies (0)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
602
Literature (8)
Shahjahan-M, Imbe-T, Jalani-B-S, Zakri-A-H, Othman-O., "Inheritance of resistance to rice tungro spherical virus in rice (Oryza sativa L.)",
Rice Genetics, II. IRRI, Manila, Philippines
, 1991, pp. 247-254
Imbe-T, Hashim-H, Iwasaki-M, Omura-T., "Resistance in some Japonica rice cultivars to rice tungro spherical virus",
Japanese Journal of Breeding
, 1993, vol. 43, pp. 549-556
Kobayashi-N, Ikeda-R, Vaughan-E-A., "Resistance to rice tungro viruses in wild species of rice (Oryza spp.)",
Japanese Journal of Breeding
, 1993, vol. 43, pp. 247-255
Kobayashi-N, Ikeda-R, Domingo-I-T, Vaughan-D-A., "Resistance to infection of rice tungro viruses and vector resistance in wild species of rice (oryza spp)",
Japanese Journal of Breeding
, 1993, vol. 43, pp. 377-387
Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D., "Saturated molecular map of the rice genome based on an interspecific backcross population",
Genetics
, 1994, vol. 138, pp. 1251-1274
Ebron-L-A, Yumol-R-R, Ikeda-R, Imbe-T., "Inheritance of resistance to rice tungro spherical virus in some rice cultivars",
IRRN
, 1994, vol. 19(4), pp. 10-11
Sebastian-L-S, Ikeda-R, Huang-N, Imbe-T, Coffman-W-R, Yano-M, Sasaki-T, McCouch-S-R., "Genetic mapping of resistance to rice tungro spherical virus (RTSV) and green leafhopper (GLH) in ARC11554",
Rice Genetics, III. IRRI, Manila, Philippines. Proceedings of the Third International Rice Genetics Symposium, ed by G S Khush
, 1996, pp. 560-564
Azzam-O, Imbe-T, Ikeda-R, Nath-P-D, Coloquio-E., "Inheritance of resistance to rice tungro spherical virus in a near-isogenic line derived from Utri Merah and in rice cultivar TKM6",
Euphytica
, 2001, vol. 122, pp. 91-97
Images (0)
SNPs (0)