Oryza sativa gene "SPL7" (GR:0060908)

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Species

Oryza sativa (Rice) [ GR_tax:013681 ]

Accession

GR:0060908

Gene Symbol

SPL7

Gene Name

SPOTTED LEAF 7

Synonyms (7)

spotted leaf-7	spl7
lrd13	lesion resembling disease-13
lrd13	lesion resembling disease-13
LOC_Os05g45410

E.C. Numbers (0)

Pathway Reactions (0)

Chromosome No.

Gene Type

CDS (Protein coding)

Has Phenotype

yes

Description

Relatively small reddish brown spots over entire surface of leaves, from tillering to heading. Phenotypes of lrd9, lrd11 and lrd13 are similar and difficult to distinguish each other.

Alleles (2)

lrd13.1
SPL7

Germplasm (2)

Sequences (8)

Protein

Gramene Protein:

Q93VB5, Q93WD1

Nucleotide (DNA)

GenBank Nucleotide:	AB050095, AB050096, AB050097, AB050098
Rice Ensembl Gene:	LOC_Os05g45410
IRGSP Gene:	Os05g0530400

Gene-To-Gene Interactions (0)

Gene Interactions (0)

Map Positions (3)

Oryza sativa Japonica Group (1)

Map Type

Map Set

Name

Map

Position

Ext. Links

Sequence

Gramene Annotated Nipponbare Sequence 2009

BNL6.32

Chr. 5

26,281,777-26,284,252bp

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Details

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Oryza sativa (2)

Map Type

Map Set

Name

Map

Position

Ext. Links

Genetic

Hokkaido Morphological 2000

BNL6.32

100-100cM

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Details

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JRGP RFLP 2000

BNL6.32

92.8-112.8cM

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Details

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Gene Map Positions (3)

Map Position [ View in Marker DB ]
#	Map Set Name	Linkage Group	Start Position	Stop Position	CMap Feature Acc
1	JRGP RFLP 2000	5	92.8 cM	112.8 cM	jrgp-2000-5-ip13
2	Hokkaido Morphological 2000	5	100 cM	100 cM	morph-2000-5-15
3	Rice japonica MSU6	Chr. 5	26281777 bp	26284252 bp	grjp2009a-5-GR:0060908

Associated Ontologies (18)

Trait	mimic response (TO:0000063)
Plant Structure	vascular leaf (PO:0009025)
Plant Growth and Development Stage	booting stage (PO:0007014), inflorescence emergence stage (PO:0007041), LP.05 five leaves visible stage (PO:0007065), 2 formation of axillary shoot stage (PO:0007073), stem elongation stage (PO:0007089), LP.06 six leaves visible stage (PO:0007123)
Cereal Plant Growth Stage	06-heading stage (GRO:0007044), 04-stem elongation stage (GRO:0007048), 03-tillering stage (GRO:0007049), 05-booting stage (GRO:0007148)
Cellular Component	nucleus (GO:0005634)
Molecular Function	DNA binding (GO:0003677), sequence-specific DNA binding transcription factor activity (GO:0003700)
Biological Process	regulation of transcription, DNA-dependent (GO:0006355), biological_process (GO:0008150)
Environment	unknown environment (EO:0007403)