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Release Notes
Browse Ontology Database by:
Trait
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Plant Structure
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
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Type:
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d1
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GR:0060184
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Oryza sativa gene "SH3" (GR:0060875)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060875
Gene Symbol
SH3
Gene Name
SHATTERING 3
Synonyms (4)
Sh3
Shattering-3
Sh3
Shattering-3
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
4
Gene Type
Not sequenced
Has Phenotype
yes
Description
High rate of seed shattering. Gene from wild rice.
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (1)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
4
80-80cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (1)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
4
80 cM
80 cM
morph-2000-4-15
Associated Ontologies (4)
Trait
grain shattering
(TO:0000473)
Plant Structure
seed
(PO:0009010)
Plant Growth and Development Stage
whole plant fruit ripening complete stage
(PO:0007038)
Biological Process
cell wall modification involved in abscission
(GO:0009830)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
621
Literature (4)
Eiguchi-M, Sano-Y., "A gene complex responsible for seed shattering and panicle spreading found in common wild rices",
Rice Genetics Newsletter
, 1990, vol. 7, pp. 105-107
Sano-Y, Eiguchi-M., "A gene complex responsible for seed shedding and spreading panicle found in wild rice",
Japan J Breed
, 1990, vol. 40(Suppl. 1), pp. 460-461
Kontani-M, Takagi-K, Onishi-K, Sano-Y., "A seed-shattering gene on chromosome 3 detected from a wild rice",
Breeding Res.
, 2004, vol. 6 (Suppl.2), p. 173
Nimura-N, Ishikawa-R, Kamijima-O, Ishii-T., "Seed shattering controlled by the shattering genes from wild rice (Oryza rufipogon) in the genetic background of O. sativa Nipponbare",
Breeding Res.
, 2004, vol. 6 (Suppl.2), p. 172
Images (0)
SNPs (0)
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Oryza sativa gene "SH3" (GR:0060875) 
Alleles (0)
Map Positions (1) 
