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Browse Ontology Database by:
Trait
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Plant Structure
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
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Type:
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E.g.,
d1
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GR:0060184
,
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Oryza sativa gene "SALT" (GR:0060835)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060835
Gene Symbol
SALT
Gene Name
SALT PROTEIN
Synonyms (7)
SalT1*
Salt tolerance-1
sal1
Sal1
Salt tolerance-1
Sal1
Salt tolerance-1
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
1
Gene Type
Not sequenced
Has Phenotype
yes
Description
under curation
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (0)
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 2001
1
57.85 cM
57.85 cM
cu-sl-2001-1-64
2
Cornell RFLP 1994
1
74.7 cM
74.7 cM
cu-sl-1994-1-25
Associated Ontologies (6)
Trait
salt sensitivity
(TO:0000429)
Plant Structure
whole plant
(PO:0000003)
, plant structure
(PO:0009011)
Plant Growth and Development Stage
whole plant development stage
(PO:0007033)
, plant structure development stage
(PO:0009012)
Biological Process
response to salt stress
(GO:0009651)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
451
Literature (8)
Moeljopawiro-S, Ikehashi-H., "Inheritance of salt tolerance in rice",
Euphytica
, 1981, vol. 30, pp. 291-300
Claes-B, Dekeyser-R, Villarroel-R, Van_den_Bulcke-M, Bauw-G, Montagu-M-V, Caplan-A., "Characterization of a rice gene showing organ-specific expression in response to salt stress and drought",
The Plant cell
, 1990, vol. 2, pp. 19-27
Gregorio-B, Senadhira-D., "Genetic analysis of salinity tolerance in rice (Oryza sativa L.)",
Theor. Appl. Genet.
, 1993, vol. 86, pp. 333-338
Tanksley-S-D, Fulton-T-M, McCouch-S-R., "Linkage map of rice (Oryza sativa) (2N24)",
Genetic Maps, Locus Maps of Complex Genomes, Book 6. Plants. S.J. OBrien ed. Cold Spring Harbour Lab. Press.
, 1993, pp. 61-79
Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D., "Saturated molecular map of the rice genome based on an interspecific backcross population",
Genetics
, 1994, vol. 138, pp. 1251-1274
Kurata-N, Nagamura-Y, Yamamoto-K, Harushima-Y, Sue-N, Wu-J, Antonio-B-A, Shomura-A, Shimizu-T, Lin-S-Y, Inoue-T, Fukuda-A, Shimano-T, Kuboki-Y, Toyama-T, Miyamoto-Y, Kirihara-T, Hayasaka-K, Miyao-A, Monna-L, Zhong-H-S, Tamura-Y, Wang-Z-X, Momma-T, Umehara-Y, Yano-M, Sasaki-T, Minobe-Y., "A 300 kilobase interval genetic map of rice including 883 expressed sequences",
Nature genetics
, 1994, vol. 8, pp. 365-372
Zhang-G-Y, Guo-Y, Chen-S-L, Chen-S-Y., "RFLP tagging of a salt tolerance gene in rice",
Plant science
, 1995, vol. 110, pp. 227-234
Zhu-G-Y, Kinet-J-M, Bertin-P, Bouharmont-J, Lutts-S., "Crosses between cultivars and tissue culture-selected plants for salt resistance improvement in rice, Oryza sativa",
Plant Breeding
, 2000, vol. 119, pp. 497-504
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