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Release Notes
Browse Ontology Database by:
Trait
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Plant Structure
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Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
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GenBank Accession
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Type:
Not sequenced
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Species:
Aegilops
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All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
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Oryza sativa gene "RK1" (GR:0060761)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060761
Gene Symbol
RK1
Gene Name
ROUND KERNEL 1
Synonyms (4)
rk1
round kernel-1
rk1
round kernel-1
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
4
Gene Type
Not sequenced
Has Phenotype
yes
Description
Short round grain with slightly flattened shape, showing about 1.40 of a length to breadth ratio of kernel.
Alleles (2)
rk1.1
rk1.2
Germplasm (2)
`Hempei-to' (HO.639)
M 88
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (1)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
4
60-130cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (1)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
4
60 cM
130 cM
morph-2000-4-ip8
Associated Ontologies (6)
Trait
seed width
(TO:0000149)
, brown rice shape
(TO:0000287)
Plant Structure
seed
(PO:0009010)
Plant Growth and Development Stage
whole plant fruit ripening complete stage
(PO:0007038)
Cereal Plant Growth Stage
09-mature grain stage
(GRO:0007045)
Biological Process
biological_process
(GO:0008150)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
593
Literature (3)
Iwata-N, Omura-T., "Studies on the trisomics in rice plants (Oryza sativa L) III Relation between trisomics and genetic linkage groups",
Japan J Breed
, 1975, vol. 25(6), pp. 363-368
Iwata-N, Omura-T., "Linkage studies in rice (Oryza sativa L) On some mutants derived from chronic gamma irradiation",
J Fac Agr Kyushu Univ
, 1977, vol. 21, pp. 117-127
Iwata-N, Omura-T., "Studies on the trisomics in rice plants (Oryza sativa L) VI An accomplishment of a trisomic series in japonica rice plants",
Japanese journal of genetics
, 1984, vol. 59(3), pp. 199-204
Images (2)
1.
1. Matured grains (top row) and brown rices (bottom row) of short round kernels.
2.
2. Round shaped kernels due to rk1 (on right) and normal (on left).
SNPs (0)