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Browse Ontology Database by:
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Plant Structure
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
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GenBank Accession
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Type:
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With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
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Oryza sativa gene "RFWA2" (GR:0060746)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060746
Gene Symbol
RFWA2
Gene Name
SMALL GTP-BINDING PROTEIN 1
Synonyms (7)
RfWA2*
Rf(u)
Pollen fertility restoration for WA cytoplasm
Rf8
Pollen fertility restoration-8
Rf8
Pollen fertility restoration-8
E.C. Numbers (0)
Pathway Reactions (0)
Gene Type
Not sequenced
Has Phenotype
yes
Description
Restores pollen fertility for wild abortive (WA) cytoplasm. Need allelic test with Rf1 and Rf6.
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (4)
Oryza sativa (2)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
IGCN 1998
BNL6.32
10
96.1-96.1cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
JRGP RFLP 2000
BNL6.32
10
44.3-55.6cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (2)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 1994
BNL6.32
10
74.6-74.6cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Cornell RFLP 2001
BNL6.32
10
64.55-64.55cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (4)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 1994
10
74.6 cM
74.6 cM
cu-sl-1994-10-ip1
2
Cornell RFLP 2001
10
64.55 cM
64.55 cM
cu-sl-2001-10-ip3
3
IGCN 1998
10
96.1 cM
96.1 cM
igcn-1998-10-ip1
4
JRGP RFLP 2000
10
44.3 cM
55.6 cM
jrgp-2000-10-ip18
Associated Ontologies (4)
Trait
male fertility restoration trait
(TO:0000308)
Plant Structure
anther
(PO:0009066)
Plant Growth and Development Stage
whole plant flowering stage
(PO:0007016)
Biological Process
multicellular organismal development
(GO:0007275)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
2068
Literature (6)
Bharaj-T-S, Virmani-S-S, Khush-G-S., "Chromosomal location of fertility restoring genes for `wild abortive' cytoplasmic male sterility using primary trisomics in rice",
Euphytica
, 1995, vol. 83, pp. 169-173
Yao-F-Y, Xu-C-G, Yu-S-B, Li-J-X, Gao-Y-J, Li-X-H, Zhang-Q, Yu-J-X, Li-Y-J, Gao-X-H, Zhang-Q-F., "Mapping and genetic analysis of two fertility restorer loci in the wild-abortive cytoplasmic male sterility system of rice (Oryza sativa L.)",
Euphytica
, 1997, vol. 98, pp. 183-187
Tan-X-L, Vanavichit-A, Amornsilpa-S, Trangoonrung-S., "Mapping of rice Rf gene by bulked line analysis",
DNA research : an international journal for rapid publication of reports on genes and genomes
, 1998, vol. 5, pp. 15-18
Tan-X-L, Vanavichit-A, Amornsilpa-S, Trangoonrung-S., "Genetic analysis of rice CMS-WA fertility restoration based on QTL mapping",
Theoretical and applied genetics
, 1998, vol. 97(5/6), pp. 994-999
Huang-Q, He-Y, Jin-R, Huang-H, Zhu-Y., "Tagging of the restorer gene for rice HL-type CMS using microsatellite markers",
Rice Genetics Newslett.
, 1999, vol. 16, pp. 75-77
Zhuang-J-Y, Fan-Y-Y, Wu-J-L, Xia-Y-W, Zheng-K-L., "Mapping major and minor QTL for rice CMS-WA fertility restoration",
Rice Geneteics Newslett.
, 2000, vol. 17, pp. 56-59
Images (0)
SNPs (0)