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Browse Ontology Database by:
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Gene Symbol & Name
Gene Accession
Chromosome No.
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d1
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dwarf-1
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GR:0060184
,
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Oryza sativa gene "RF3" (GR:0060742)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060742
Gene Symbol
RF3
Gene Name
RESTORATION OF FERTILITY 3
Synonyms (7)
Rf2
Pollen fertility restoration for WA cytoplasm
R2
Rf3
Pollen fertility restoration-3
Rf3
Pollen fertility restoration-3
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
1
Gene Type
Not sequenced
Has Phenotype
yes
Description
Restores pollen fertility for wild abortive (WA) cytoplasm. Duplicate gene with Rf8 (Rf(u)).
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell SSR 2001
BNL6.32
1
36.8-40.6cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
1
23.4-27.2cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 2001
1
23.4 cM
27.2 cM
cu-sl-2001-1-ip9
2
Cornell SSR 2001
1
36.8 cM
40.6 cM
cu-dh-2001-1-ip1
Associated Ontologies (4)
Trait
male fertility restoration trait
(TO:0000308)
Plant Structure
anther
(PO:0009066)
Plant Growth and Development Stage
whole plant flowering stage
(PO:0007016)
Biological Process
multicellular organismal development
(GO:0007275)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
447
Literature (18)
Young-J-B, Virmani-S-S., "Inheritance of fertility restoration in a rice cross",
Rice Genetics Newslett.
, 1984, vol. 1, pp. 102-103
Lu-Y-G, Zhang-G-Q., "Breeding for an isogenic restorer line of CMS Zhen-shan 97A",
Rice Genetics Newsletter
, 1986, vol. 3, pp. 90-91
Govinda Raj-K, Virmani-S-S., "Genetics of fertility restoration of ‘WA’ type cytoplasmic male sterility in rice",
Crop Sci.
, 1988, vol. 28, pp. 787-792
Bharaj-T-S, Bains-S-S, Sidhu-G-S, Gagneja-M-R., "Genetics of fertility restoration of 'wild abortive' cytoplasmic male sterility in rice, Oryza sativa L",
Euphytica
, 1991, vol. 56, pp. 199-203
Teng-L-S, Shen-Z-T., "Inheritance of fertility restoration for cytoplasmic male sterility in rice",
Rice Genetics Newsletter
, 1994, vol. 11, pp. 95-97
Zhang-G, Lu-Y, Huang-N., "Molecular analysis of introgressed chromosomal segments in a set of near-isogenic lines of rice for fertility-restoring genes",
Rice Genetics Newsletter
, 1994, vol. 11, pp. 147-149
Zhang-G, Lu-Y, Huang-N., "Molecular mapping of fertility-restoring gene Rf3 in rice",
IRRN
, 1996, vol. 21(2-3), pp. 16-17
Zhang-Q, Saghai-Maroof-M-A, Yang-G-P, Liu-K-D, Zhou-Z-Q, Gravois-K-A, Xu-C-G, Gao-Y-J., "Relationships between molecular marker polymorphism and hybrid performance in rice",
Rice Genetics, III. IRRI, Manila, Philippines. Proceedings of the Third International Rice Genetics Symposium, ed by G S Khush
, 1996, pp. 317-325
Zhu-L-H, Lu-C, Li-P, Shen-L, Xu-Y, He-P, Chen-Y., "Using doubled haploid populations of rice for quantitative trait locus mapping",
Rice Genetics, III. IRRI, Manila, Philippines. Proceedings of the Third International Rice Genetics Symposium, ed by G S Khush
, 1996, pp. 631-636
Huang-N, Parco-A, Mew-T, Magpantay-G, McCouch-S-R, Guiderdoni-E, Xu-J, Subudhi-P, Angeles-E-R, Khush-G-S, Xu-J-C., "RFLP mapping of isozymes, RAPD and QTLs for grain shape, brown planthopper resistance in a doubled haploid rice population",
Mol Breed
, 1997, vol. 3, pp. 105-113
Yang-D-C, Magpantay-G-B, Mendoza-M, Huang-N, Brar-D-S., "Construction of a contig for a fertility restorer gene, Rf2 in rice using BAC library and its sequence homology with Rf2 gene of maize",
Rice Genetics Newsletter
, 1997, vol. 14, pp. 116-118
Yang-Z., "Inheritance of photoperiod sensitive genic male sterility and breeding of photoperiod sensitive genic male-sterile lines in rice (Oryza sativa L.) through anther culture",
Euphytica
, 1997, vol. 94, pp. 93-99
Yao-F-Y, Xu-C-G, Yu-S-B, Li-J-X, Gao-Y-J, Li-X-H, Zhang-Q, Yu-J-X, Li-Y-J, Gao-X-H, Zhang-Q-F., "Mapping and genetic analysis of two fertility restorer loci in the wild-abortive cytoplasmic male sterility system of rice (Oryza sativa L.)",
Euphytica
, 1997, vol. 98, pp. 183-187
Zhang-G, Bharaj-T-S, Lu-Y, Virmani-S-S, Huang-N., "Mapping of the Rf-3 nuclear fertility-rstoring gene for WA cytoplasmic male sterility in rice using RAPD and RFLP markers",
Theoretical and applied genetics
, 1997, vol. 94, pp. 27-33
Zhang-Q, Liu-K-D, Yang-G-P, Maroof-M-A-S, Xu-C-G, Zhou-Z-Q., "Molecularmarker diversity and hybrid sterility in indica-japonica rice crosses",
Theoretical and applied genetics
, 1997, vol. 95, pp. 112-118
Nguyen-T-L, Zhang-G, Magpantay-G, Virmani-S-S, Huang-N, Brar-D-S, Khush-G-S, Li-Z-K., "PCR-based DNA markers for the WA-CMS fertility restoring gene Rf-3 in rice",
Rice Genetics Newslett.
, 1998, vol. 15, pp. 156-158
Sarial-A-K, Singh-V-P., "Identification of restorers and maintainers for developing basmati and non-basmati hybrids in rice, Oryza sativa",
Plant Breeding
, 2000, vol. 119, pp. 234-247
Zhuang-J-Y, Fan-Y-Y, Wu-J-L, Xia-Y-W, Zheng-K-L., "Mapping major and minor QTL for rice CMS-WA fertility restoration",
Rice Geneteics Newslett.
, 2000, vol. 17, pp. 56-59
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