Oryza sativa gene "PS2" (GR:0060704)

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Species

Oryza sativa (Rice) [ GR_tax:013681 ]

Accession

GR:0060704

Gene Symbol

PS2

Gene Name

PURPLE STIGMA 2

Synonyms (5)

Ps1	Ps2
Purple stigma-2	Ps2
Purple stigma-2

E.C. Numbers (0)

Pathway Reactions (0)

Chromosome No.

Gene Type

Not sequenced

Has Phenotype

yes

Description

Stigma coloration due to anthocyanin pigment under the presence of Cp, Ap, and Pa. Ps2 takes part in stigma coloration when Cp and Ap loci contain alleles of high potency (see description of alleles for Cp and Ap).

Alleles (1)

Ps2.1

Germplasm (25)

Sequences (0)

Gene-To-Gene Interactions (0)

Gene Interactions (0)

Map Positions (1)

Oryza sativa (1)

Map Type

Map Set

Name

Map

Position

Ext. Links

Genetic

Hokkaido Morphological 2000

BNL6.32

46-46cM

View Comparative Map

Details

CMap Preview

Gene Map Positions (1)

Map Position [ View in Marker DB ]
#	Map Set Name	Linkage Group	Start Position	Stop Position	CMap Feature Acc
1	Hokkaido Morphological 2000	4	46 cM	46 cM	morph-2000-4-7

Associated Ontologies (13)

Trait	stigma color (TO:0000185)
Plant Structure	PO:0006497 (PO:0006497)
Plant Growth and Development Stage	whole plant fruit ripening stage (PO:0007010), booting stage (PO:0007014), whole plant fruit ripening complete stage (PO:0007038), inflorescence emergence stage (PO:0007041), whole plant fruit formation stage (PO:0007042)
Cereal Plant Growth Stage	08-dough stage (GRO:0007042), 06-heading stage (GRO:0007044), 09-mature grain stage (GRO:0007045), 07-milk stage (GRO:0007046), 05-booting stage (GRO:0007148)
Biological Process	flavonoid metabolic process (GO:0009812)

Associated QTL (0)

Database Cross-References (1)

Oryzabase: 613

Literature (4)

Images (1)

1.	1. Stigma coloration accompanied by apiculus color (Cp.2(C-B), Ap(A), Pa(P) and Ps2).

SNPs (0)