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Browse Ontology Database by:
Trait
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Plant Structure
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
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All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
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view help
Oryza sativa gene "LAX" (GR:0060493)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060493
Gene Symbol
LAX
Gene Name
LAX PANICLE
Synonyms (5)
lx
lax
lax panicle
lax
lax panicle
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
1
Gene Type
Not sequenced
Has Phenotype
yes
Description
Very sparse setting of spikelets; various deformities and complete absence of spikelets are observed under low temperature conditions.
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
1
119-119cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
1
97.3-112.35cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
1
119 cM
119 cM
morph-2000-1-22
2
Cornell RFLP 2001
1
97.3 cM
112.35 cM
cu-sl-2001-1-ip19
Associated Ontologies (7)
Trait
panicle type
(TO:0000089)
, spikelet sterility
(TO:0000436)
, spikelet weight
(TO:0000501)
Plant Structure
inflorescence
(PO:0009049)
, spikelet
(PO:0009051)
Plant Growth and Development Stage
sporophyte reproductive stage
(PO:0007130)
Biological Process
multicellular organismal development
(GO:0007275)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
477
Literature (22)
Takezaki-Y., "Inheritance of some lax panicles",
Japan. J. Genet.
, 1932, vol. 8, pp. 49-63
Morinaga-T, Fukushima-E., "Heritable characters in rice 1 Abnormal mutant characters and their mode of inheritance",
Sci Bull Fac Agric Kyusyu Imp Univ
, 1943, vol. 10, pp. 301-339
Iwata-N, Omura-T., "Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L). II. Linkage groups corresponding to the chromosomes 5,6,8,9,10 and 11",
Sci Bull Fac Agr Kyushu Univ
, 1971, vol. 25(3.4), pp. 137-153
Iwata-N, Omura-T., "Linkage analysis by reciprocal translocation method in rice plants (Oryza sativa L) I Linkage groups corresponding to the chromosome 1, 2, 3 and 4",
Japan J Breed
, 1971, vol. 21(1), pp. 19-28
Iwata-N, Omura-T., "Linkage studies in rice (Oryza sativa L) On some mutants derived from chronic gamma irradiation",
J Fac Agr Kyushu Univ
, 1977, vol. 21, pp. 117-127
Iwata-N, Satoh-H, Omura-T., "Linkage studies in rice Linkage groups for 6 genes newly described",
Japan J Breed
, 1977, vol. 27(Suppl 1), pp. 250-251
Iwata-N, Omura-T., "Linkage studies in rice (Oryza sativa L). Some albino genes and their linkage relation with marker genes",
Sci Bull Fac Agr Kyushu Univ
, 1978, vol. 33(1), pp. 11-18
Iwata-N, Omura-T, Satoh-H., "Linkage studies in rice. The sequence of genes at the eight and eleventh linkage groups",
Japanese Journal of Breeding
, 1978, vol. 28(Suppl.1), pp. 170-171
Iwata-N, Omura-T., "Linkage studies in rice (Oryza sativa L) Some albino genes and their linkage relation with marker genes",
Sci Bull Fac Agr Kyushu Univ
, 1978, vol. 33(1), pp. 18-18
Futsuhara-Y, Kondo-S, Kitano-H., "Genetical studies on dense and lax panicles in rice II. Character expression and mode of inheritance of dense panicle rice",
Japan J Breed
, 1979, vol. 29(3), pp. 239-247
Kinoshita-T., "Gene analysis and linkage map",
Biology of Rice. Tsunoda-S, Takahashi-N (eds.), JSSP/Elsevier, Tokyo.
, 1984, pp. 187-274
Iwata-N, Satoh-H, Yoshimura-A., "Linkage studies in rice (Oryza sativa L.). Linkage map of chromosome 3",
Bull Inst Trop Agr, Kyushu Univ
, 1989, vol. 12, pp. 1-9
Iwata-N, Satoh-H, Yoshimura-A., "Linkage map for Nishimura's chromosome 8",
Rice Genetics Newsletter
, 1989, vol. 6, pp. 106-108
Iwata-N, Satoh-H, Yoshimura-A., "Linkage studies in rice (Oryza sativa L) Linkage map of chromosome 3",
Bull Inst Trop Agr Kyushu Univ
, 1989, vol. 12, pp. 9-9
Yano-M, Saito-A, Yoshimura-A, Kuhara-S, Yoshimura-S, Ikeda-O, Kishimoto-N, Saito-K, Ohsawa-R, Kawase-K, Nagamine-T, Ogawa-T, Nakagahra-M, Iwata-N., "Chromosome identification of rice RFLP linkage groups",
Japan J Breed
, 1990, vol. 40(Suppl. 1), pp. 468-469
Saito-A, Yano-M, Kishimoto-N, Nakagahra-M, Yoshimura-A, Saito-K, Kuhara-S, Ukai-Y, Kawase-M, Nagamine-T, Yoshimura-S, Ideta-O, Ohsawa-R, Hayano-Y, Iwata-N, Sugiura-M., "Linkage map of restriction fragment length polymorphism loci in rice",
Japanese Journal of Breeding
, 1991, vol. 41, pp. 665-670
Nadaf-S-K, Goud-J-V, Parameswarappa-R., "Genetic studies in rice (Oryza sativa L ) I Differential nature of inheritance of anthocyanin pigmentation in leaf blade at seedling and flowering stages",
Oryza Cuttack
, 1992, vol. 29, pp. 93-96
Yu-Z-H, Kinoshita-T, Sato-S, Tanksley-S-D., "Morphological and RFLP markers are associated in rice",
RGN
, 1992, vol. 9, pp. 116-118
Tanksley-S-D, Fulton-T-M, McCouch-S-R., "Linkage map of rice (Oryza sativa) (2N24)",
Genetic Maps, Locus Maps of Complex Genomes, Book 6. Plants. S.J. OBrien ed. Cold Spring Harbour Lab. Press.
, 1993, pp. 61-79
Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D., "Saturated molecular map of the rice genome based on an interspecific backcross population",
Genetics
, 1994, vol. 138, pp. 1251-1274
Murai-M, Iizawa-M., "Effects of major genes controlling morphology of panicle in rice",
Breed Sci
, 1994, vol. 44, pp. 247-255
Yu-Z-H, McCouch-S-R, Kinoshita-T, Sato-S, Tanksley-S-D., "Association of morphological and RFLP markers in rice (Oryza sativa L.)",
Genome ( National Research Council Canada )
, 1995, vol. 38, pp. 566-574
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