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Browse Ontology Database by:
Trait
|
Plant Structure
|
Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
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Type:
Not sequenced
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With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
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Oryza sativa gene "G1" (GR:0060340)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060340
Gene Symbol
G1
Gene Name
LONG STERILE LEMMAS 1
Synonyms (5)
lng
g1
long sterile lemmas-1
g1
long sterile lemmas-1
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
7
Gene Type
Not sequenced
Has Phenotype
yes
Description
Empty glumes are nearly as long as the lemma and palea.
Alleles (1)
g1.1
Germplasm (2)
CM1554
Wase-asahi
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (2)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
7
6-6cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
JRGP RFLP 2000
BNL6.32
7
0.8-0.8cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
7
6 cM
6 cM
morph-2000-7-2
2
JRGP RFLP 2000
7
0.8 cM
0.8 cM
jrgp-2000-7-ip25
Associated Ontologies (13)
Trait
sterile lemma length
(TO:0000240)
Plant Structure
lemma
(PO:0009037)
, palea
(PO:0009038)
, glume
(PO:0009039)
Plant Growth and Development Stage
whole plant fruit ripening stage
(PO:0007010)
, whole plant fruit ripening complete stage
(PO:0007038)
, inflorescence emergence stage
(PO:0007041)
, whole plant fruit formation stage
(PO:0007042)
Cereal Plant Growth Stage
08-dough stage
(GRO:0007042)
, 06-heading stage
(GRO:0007044)
, 09-mature grain stage
(GRO:0007045)
, 07-milk stage
(GRO:0007046)
Biological Process
multicellular organismal development
(GO:0007275)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
811
Literature (20)
Parnell-F-R, Rangaswamy-Ayyangar-G-N, Ramiah-K., "The inheritance of characters in rice",
I. Mem. Dept. Agr. Indian Bot.
, 1917, vol. "Ser., 9", pp. 75-105
Chao-L-F., "Linkage studies in rice",
Genetics
, 1928, vol. 13, pp. 133-169
Chao-L-F., "The disturbing effect of the glutinous gene on a mendelian ratio",
Genetics:
, 1928, vol. 13, pp. 191-222
Jones-J-W.Jones-J-W.., "Inheritance of characters in rice",
J. Agri. Res.
, 1933, vol. 47, pp. 771-782
Ramiah-K., "Rice Genetics",
Proc. Assoc. Econ. Biologists
, 1935, vol. 3, pp. 51-61
Morinaga-T, Fukushima-E., "Heritable characters in rice 1 Abnormal mutant characters and their mode of inheritance",
Sci Bull Fac Agric Kyusyu Imp Univ
, 1943, vol. 10, pp. 301-339
Nagao-S., "Genic analysis and linkage relationship of characters in rice",
Advances in genetics
, 1951, vol. 4, pp. 181-212
Nagao-S, Takahashi-M., "Trial construction of twelve linkage groups in Japanese rice (Genetical studies on rice plant, XXVII)",
J Fac Agr Hokkaido Univ
, 1963, vol. 53(1), pp. 72-130
Seetharaman-R., "Certain considerations on genic analysis and linkage groups in rice",
Symp Rice Genet Cytogenet, Internatl Rice Res Inst (1963) Elsevier, Amsterdam
, 1964, pp. 205-214
Jodon-N-E., "Gentetic segregation and linkage, important phases of rice research",
Symp Rice Genet Cytogenet, Internatl Rice Res Inst (1963) Elsevier, Amsterdam
, 1964, pp. 193-204
Sastry-M-V-S., "Inheritance of genes controlling glume size, pericarp colour and their inter-relationship in indica rices",
Oryza Cuttack
, 1978, vol. 15(1), pp. 176-179
Iwata-N, Satoh-H, Omura-T., "Linkage analysis by use of trisomics in rice (Oryza sativa L) IV Linkage groups locating on chromosomes 2 and 10",
Japan J Breed
, 1981, vol. 31(Suppl 1), pp. 66-67
Kinoshita-T., "Gene analysis and linkage map",
Biology of Rice. Tsunoda-S, Takahashi-N (eds.), JSSP/Elsevier, Tokyo.
, 1984, pp. 187-274
Satoh-H, Iwata-N., "Linkage analysis in rice. On three mutant loci for endosperm properties, ge(giant embryo), du-4(dull endosperm-4) and flo-1(floury endosperm-1)",
Japan J Breed
, 1990, vol. 40(Suppl. 2), pp. 268-269
Ideta-O, Yoshimura-A, Matsumoto-T, Tsunematsu-H, Mikoda-T, Satoh-H, Iwata-N., "Integration of conventional and RFLP linkage maps in rice. III. On the arrangement of some marker genes and RELP markers",
Japan J Breed
, 1992, vol. 42(Suppl. 2), pp. 126-127
Takamure-I, Kinoshita-T., "Modification of glume characters due to genic interactions and environmental conditions",
Rice Genetics Newsletter
, 1992, vol. 9, pp. 85-88
Ideta-O, Yoshimura-A, Ashikari-M, Iwata-N., "Integration of conventional and RFLP linkage maps in rice. III. Choromosomes 5, 7, 8 and 12",
RGN
, 1994, vol. 11, pp. 116-117
Eiguchi-M, Sano-Y., "Evolutionary significance of chromosome 7 in an annual type of wild rice",
Rice Genetics Newsletter
, 1995, vol. 12, pp. 187-189
Yoshimura-A, Ideta-O, Iwata-N., "Linkage map of phenotype and RFLP markers in rice",
Plant molecular biology
, 1997, vol. 35, pp. 49-60
Sanchez-A-C, Khush-G-S., "Inheritance and linkage relationships of twenty-one genes in rice, Oryza sativa. L",
SABRAO J
, 1998, vol. 30(2):, pp. 51-60
Images (2)
1.
1. Kernels having long sterile lemmas.
2.
2. Kernels with long sterile lemmas (g1, on right), extra glume (eg1, in the middle) and normal (on left).
SNPs (0)