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Release Notes
Browse Ontology Database by:
Trait
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Plant Structure
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Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
Gramene Protein Accession
All Fields
Type:
Not sequenced
CDS (Protein coding)
rRNA (Ribosomal RNA)
tRNA (Transfer RNA)
Pseudogene (non-functional)
Not classified
miRNA (MicroRNA)
siRNA (Small interfering RNA)
Sequenced Gene Loci
All Gene Types
Species:
Aegilops
Aegilops x Triticum
Agropyron
Avena (Oat)
Dasypyrum
Elymus (Wild rye)
Hordeum (Barley)
Lophopyrum
Oryza sativa (Rice)
Phalaris
Secale
Sorghum bicolor (Sorghum)
Thinopyrum
Triticum
Zea mays subsp. mays (Maize)
All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
view help
Oryza sativa gene "D9" (GR:0060191)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060191
Gene Symbol
D9
Gene Name
DWARF CHINESE
Synonyms (7)
dwf8
d9
Chinese dwarf
d9
dwarf-9
d9
dwarf-9
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
6
Gene Type
Not sequenced
Has Phenotype
yes
Description
Semi-dwarf with normal grains. The gene does not exhibit deleterious effects and could be used for breeding of the short culm variety.
Alleles (1)
dwf8.1 (d9.1)
Germplasm (3)
N60
H379
H380
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (1)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
6
76-76cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (1)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
6
76 cM
76 cM
morph-2000-6-23
Associated Ontologies (11)
Trait
stem length
(TO:0000576)
Plant Structure
stem
(PO:0009047)
Plant Growth and Development Stage
booting stage
(PO:0007014)
, whole plant fruit ripening complete stage
(PO:0007038)
, inflorescence emergence stage
(PO:0007041)
, stem elongation stage
(PO:0007089)
Cereal Plant Growth Stage
06-heading stage
(GRO:0007044)
, 09-mature grain stage
(GRO:0007045)
, 04-stem elongation stage
(GRO:0007048)
, 05-booting stage
(GRO:0007148)
Biological Process
multicellular organismal development
(GO:0007275)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
763
Literature (3)
Nagao-S, Takahashi-M, Kinoshita-T., "New members of “wx”and“d1”linkage groups in rice",
Japan. J. Breed.
, 1966, vol. 16(1), p. 60
Kinoshita-T., "Gene analysis and linkage map",
Biology of Rice. Tsunoda-S, Takahashi-N (eds.), JSSP/Elsevier, Tokyo.
, 1984, pp. 187-274
Kinoshita-T, Takamure-I., "Gene mapping of the first and second linkage groups in rice",
J Fac Agr Hokkaido Univ
, 1990, vol. 64(3), pp. 208-217
Images (0)
SNPs (0)