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Browse Ontology Database by:
Trait
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Plant Structure
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
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Type:
Not sequenced
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Aegilops
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With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
view help
Oryza sativa gene "CHT1" (GR:0060133)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060133
Gene Symbol
CHT1
Gene Name
CHITINASE 1
Synonyms (9)
OsChia1
Chi1
Cht1*
Chi-1
Cht1
Chitinase-1(class I)
Chi-1
Cht1
Chitinase-1(class I)
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
6
Gene Type
Not sequenced
Has Phenotype
yes
Description
under curation
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
JRGP RFLP 2000
BNL6.32
6
123.2-124cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
6
118.4-118.4cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
JRGP RFLP 2000
6
123.2 cM
124 cM
jrgp-2000-6-ip28
2
Cornell RFLP 2001
6
118.4 cM
118.4 cM
cu-sl-2001-6-66
Associated Ontologies (1)
Molecular Function
chitinase activity
(GO:0004568)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
694
Literature (6)
Huang-J-T, Struck-F, Matzinger-D-F., "Functional analysis in yeast of cDNA coding for the mitochondrial Rieske iron-sulfur protein of higher plants",
Proceedings of the National Academy of Sciences of the United States of America
, 1991, vol. 88, pp. 10716-10720
Saito-A, Yano-M, Kishimoto-N, Nakagahra-M, Yoshimura-A, Saito-K, Kuhara-S, Ukai-Y, Kawase-M, Nagamine-T, Yoshimura-S, Ideta-O, Ohsawa-R, Hayano-Y, Iwata-N, Sugiura-M., "Linkage map of restriction fragment length polymorphism loci in rice",
Japanese Journal of Breeding
, 1991, vol. 41, pp. 665-670
Zhu-Q, Lamb-C-J., "Isolation and characterization of a rice gene encoding a basic chitinase",
Molecular & General Genetics
, 1991, vol. 226, pp. 289-296
Nishizawa-Y, Kishimoto-N, Saito-A, Hibi-T., "Sequence variation, differential expression and chromosomal location of rice chitinase genes",
Molecular & General Genetics
, 1993, vol. 241, pp. 1-10
Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D., "Saturated molecular map of the rice genome based on an interspecific backcross population",
Genetics
, 1994, vol. 138, pp. 1251-1274
Nagasaki-H, Yamamoto-K, Shomura-A, Koga-Ban-Y, Takasuga-A, Yano-M, Minobe-Y, Sasaki-T., "Rice class III chitinase homologues isolated by random cloning of rice cDNAs",
DNA research : an international journal for rapid publication of reports on genes and genomes
, 1997, vol. 4, pp. 379-385
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SNPs (0)