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Browse Ontology Database by:
Trait
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
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GenBank Accession
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Type:
Not sequenced
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Aegilops
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All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
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Oryza sativa gene "BHA" (GR:0060079)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060079
Gene Symbol
BHA
Gene Name
BLACK HULL A
Synonyms (6)
Bha
Black hull-a
Bh1
Black hull-1
Bh1
Black hull-1
E.C. Numbers (0)
Pathway Reactions (0)
Gene Type
Not sequenced
Has Phenotype
yes
Description
Hulls of mature grains are black from pigment in hypodermal cells and trichomes. "Ripening black" is occasionally in glumes in F1 plants and later generations derived from crosses between japonica and indica strains with normal straw-color glumes.
Alleles (1)
Bh1.1
Germplasm (3)
H172
H33
A136
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (0)
Gene Map Positions (0)
Associated Ontologies (6)
Trait
lemma and palea color
(TO:0000264)
Plant Structure
glume
(PO:0009039)
, seed coat
(PO:0009088)
Plant Growth and Development Stage
whole plant fruit ripening complete stage
(PO:0007038)
Cereal Plant Growth Stage
09-mature grain stage
(GRO:0007045)
Biological Process
biological_process
(GO:0008150)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
34
Literature (16)
Parnell-F-R, Rangaswamy-Ayyangar-G-N, Ramiah-K., "The inheritance of characters in rice",
II. Mem. Dept. Agr. Indian Bot.
, 1922, vol. "Ser., 11", pp. 185-208
Mitra-S-K, Ganguli-P-M., "Inheritance of inner glume colour in rice",
Indian J Agr Sci
, 1937, vol. 7, pp. 122-133
Nandi-H-K, Ganguli -P-M., "Inheritance of the colour of lemma and palea in rice",
Proc. 27th Indian Sci. Cong., Agric. Abstr.
, 1940, vol. 32, p. 221
Nagao-S, Takahashi-M., "Some genes responsible for yellow, brown and black color glume -Genetical studies on rice plant, XVI",
Japan J Breed
, 1954, vol. 4(1), pp. 25-30
Jodon-N-E., "Present status of rice genetics",
J Agr Assoc China
, 1955, vol. 10(NS), pp. 21-21
Takahashi-M., "Linkage groups and gene schemes of some striking morphological characters in Japanese rice",
Symp Rice Genet Cytogenet, Internatl Rice Res Inst (1963) Elsevier, Amsterdam
, 1964, pp. 215-236
Seetharaman-R., "Certain considerations on genic analysis and linkage groups in rice",
Symp Rice Genet Cytogenet, Internatl Rice Res Inst (1963) Elsevier, Amsterdam
, 1964, pp. 205-214
Kuriyama-H, Kudo-M., "Complementary genes Ph and Bh controlling ripening-black coloration of rice hulls and their geographical distribution",
Japanese Journal of Breeding
, 1967, vol. 17(1), pp. 13-19
Rao-C-H, Seetharaman-R., "Genetic studies in pericarp and hull colour in rice",
Indian J Genet, Plant Breed
, 1973, vol. 33(3), pp. 319-323
Kinoshita-T., "Comparative studies of linkage groups in the Japonica and Indica rice",
Current Advances in Breeding
, 1976, vol. 17, pp. 17-34
Tripathi-R-S, Rao-M-J-B-K., "Inheritance and linkage relationship of scent in rice",
Euphytica
, 1979, vol. 28, pp. 319-323
Maekawa-M, Kinoshita-T, Takahashi-M., "A new gametophyte gene in the second linkage group of rice (Genetical studies on rice plant, LXXVI)",
J Fac Agr Hokkaido Univ
, 1981, vol. 60(2), pp. 107-114
Maekawa-M., "Studies on genetical difference between distantly related rice varieties",
Mem Fac Agr Hokkaido Univ
, 1982, vol. 13(2), pp. 146-177
Kinoshita-T., "Gene analysis and linkage map",
Biology of Rice. Tsunoda-S, Takahashi-N (eds.), JSSP/Elsevier, Tokyo.
, 1984, pp. 187-274
Suzuki-Y, Ohsawa-M, Terao-J, Matsukura-U., "Development of lipoxygenases in embryo and seedling of rice variety lacking lipoxygenase-3 in its seed during ripening and germination",
Breed Sci
, 1996, vol. 46(Suppl. 1), p. 153
Rao-D-M-R, Reddy-T-P., "Genetic analysis of semidwarf mutants induced in indica rice (Oryza sativa L.)",
Euphytica
, 1997, vol. 95, pp. 45-48
Images (2)
1.
1. Panicles showing ‘ripening black’ hull.
2.
2. Mature panicles of daikoku dwarf showing black hull.
SNPs (0)