suggestions go here
Genes
Search
Quick Search
Genomes/Ensembl
Markers/Sequences
Comparative Maps
QTL
Diversity
Genes
Germplasm
Proteins
Pathways
Plant Reactome (beta)
Ontologies
Literature
BLAST
Gramene Mart
Genomes
Arabidopsis lyrata
Arabidopsis thaliana
Brachypodium distachyon
Brassica rapa
Chlamydomonas reinhardtii
Cyanidioschyzon merolae (red algae)
Glycine max (soybean)
Hordeum vulgare (Barley)
Leersia perrieri (chr 3S)
Musa acuminata (Banana)
Medicago truncatula
Oryza barthii
Oryza brachyantha
Oryza glaberrima
Oryza glumaepatula (chr 3S)
Oryza granulata (chr 3S)
Oryza longistaminata (chr 3S)
Oryza meridionalis (chr 3S)
Oryza minutaBB (chr 3S)
Oryza minutaCC (chr 3S)
Oryza nivara (chr 3S)
Oryza officinalis (chr 3S)
Oryza punctata
Oryza rufipogon (chr 3S)
Oryza rufipogon (FPC map)
Oryza sativa Indica Group
Oryza sativa (rice)
Physcomitrella patens
Populus trichocarpa (poplar)
Selaginella moellendorffii
Setaria italica (foxtail millet)
Solanum lycopersicum (tomato)
Solanum tuberosum (Potato)
Sorghum bicolor
Vitis vinifera (grape)
Zea mays
Triticum aestivum (bread wheat)
Aegilops tauschii (wheat D-genome)
Triticum urartu (wheat A-genome progenitor)
Organelles
Species
Barley (Hordeum)
Brachypodium
Foxtail Millet (Setaria)
Maize (Zea)
Oats (Avena)
Pearl Millet (Pennisetum)
Rice (Oryza)
Rye (Secale)
Sorghum (Sorghum)
Wheat (Triticum)
Wild Rice (Zizania)
Other Oryza
Download
Download Index
FTP Site
Resources
Links Pages
Submit a Term
Newsletters
Web Services
Gene Nomenclature
About
Contact Us
About Us
Outreach Program
Brochure
Advisory Board
Collaborators
Gramene Newsletter
Cite Gramene
Help
Site Map
Help Documents
Release Notes
Tutorials and Exercises
Glossary
FAQs
Gramene Documentation
Workshop Materials
Mailing Lists
Ask Us
Feedback
Gene Home
|
Search
| |
Submit
|
Help
|
Tutorial
|
FAQ
|
Release Notes
Browse Ontology Database by:
Trait
|
Plant Structure
|
Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
Gramene Protein Accession
All Fields
Type:
Not sequenced
CDS (Protein coding)
rRNA (Ribosomal RNA)
tRNA (Transfer RNA)
Pseudogene (non-functional)
Not classified
miRNA (MicroRNA)
siRNA (Small interfering RNA)
Sequenced Gene Loci
All Gene Types
Species:
Aegilops
Aegilops x Triticum
Agropyron
Avena (Oat)
Dasypyrum
Elymus (Wild rye)
Hordeum (Barley)
Lophopyrum
Oryza sativa (Rice)
Phalaris
Secale
Sorghum bicolor (Sorghum)
Thinopyrum
Triticum
Zea mays subsp. mays (Maize)
All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
view help
Oryza sativa gene "ADH2" (GR:0060012)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060012
Gene Symbol
ADH2
Gene Name
ALCOHOL DEHYDROGENASE 2
Synonyms (4)
Adh2
Alcohol dehydrogenase-2
Adh2
Alcohol dehydrogenase-2
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
11
Gene Type
Not sequenced
Has Phenotype
yes
Description
under curation
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (3)
Oryza sativa (2)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
9
0-63cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
QTL
TKU Integrated QTL 2002
BNL6.32
11
59.1-59.1cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
11
25.9-53.2cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (3)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 2001
11
25.9 cM
53.2 cM
cu-sl-2001-11-ip22
2
Hokkaido Morphological 2000
9
0 cM
63 cM
morph-2000-9-ip9
3
TKU Integrated QTL 2002
11
59.1 cM
59.1 cM
tot2002a-146
Associated Ontologies (1)
Molecular Function
alcohol dehydrogenase (acceptor) activity
(GO:0018468)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
840
Literature (15)
Ranjhan-S, Glaszmann-J-C, Khush-G-S., "Localization of Pgi-1, Sdh-1, Est-9 and Adh-1 on rice chromosomes by trisomic analysis",
Rice Genetics Newsletter
, 1986, vol. 3, pp. 56-58
Ranjhan-S, Glaszmann-J-C, Ramirez-D-A, Khush-G-S., "Choromosomal localization of four isozyme loci by trisomic analysis in rice (Oryza sativa L.)",
Theoretical and applied genetics
, 1988, vol. 75, pp. 541-545
Ishikawa-R, Morishima-H, Mori-K, Kinoshita-T., "Choromosomal analysis of isozyme loci and the allelic expression at cellular level in rice. Genetical studies on rice plant, XCVII",
J Fac Agr Hokkaido Univ
, 1989, vol. 64(1), pp. 85-98
Ishikawa-R, Morishima-H., "Linkage analysis for four isozyme loci, Adh-1, Acp-1, Pox-2 and Pgd-2",
Rice Genetics Newsletter
, 1989, vol. 6, pp. 109-110
Ishikawa-R., "Integration of isozyme genes on chromosome 12 into a linkage map",
Rice Genetics Newsletter
, 1991, vol. 8, pp. 100-101
Ishikawa-R, Morishima-H, Kinoshita-T., "Linkage analysis and application of isozyme genes in rice",
Rice Genetics, II. IRRI, Manila, Philippines
, 1991, pp. 127-136
Ishikawa-R, Morishima-H, Kinoshita-T, Harada-T, Niizeki-M, Saito-K., "Linkage analysis of nine isozyme genes on the conventional linkage map in rice",
Japanese Journal of Breeding
, 1991, vol. 41(2), pp. 265-272
Ranjhan-S, Litts-J-C, Foolad-M-R, Rodriguez-R-L., "Chromosomal localization and genomic organization of alpha-amylase genes in rice (Oryza sativa L.)",
Theoretical and applied genetics
, 1991, vol. 82, pp. 481-488
Huang-N, Parco-A, Mew-T, Magpantay-G, McCouch-S-R, Guiderdoni-E, Xu-J, Subudhi-P, Angeles-E-R, Khush-G-S, Xu-J-C., "RFLP mapping of isozymes, RAPD and QTLs for grain shape, brown planthopper resistance in a doubled haploid rice population",
Mol Breed
, 1997, vol. 3, pp. 105-113
Ge-S, Oliveira-G-C, Schaal-B-A, Gao-L-Z, Hong-D-Y., "RAPD variation within and between natural populations of the wild rice oryza rufipogon from china and brazil",
Heredity
, 1999, vol. 82, pp. 638-644
Ge-S, Sang-T, Lu-B-R, Hong-D-Y., "Phylogeny of rice genomes with emphasis on origins of allotetraploid species",
Proceedings of the National Academy of Sciences of the United States of America
, 1999, vol. 96, pp. 14400-14405
Tarchini-R, Biddle-P, Wineland-R, Tingey-S, Rafalski-A., "The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4",
The Plant cell
, 2000, vol. 12, pp. 381-391
Ge-S, Sang-T, Lu-B-R, Hong-D-Y., "Rapid and reliable identification of rice genomes by RFLP analysis of PCR-amplified Adh genes",
Genome ( National Research Council Canada )
, 2001, vol. 44, pp. 1136-1142
Ge-S, Sang-T, Lu-B-R, Hong-D-Y., "Phylogeny of the genus Oryza as revealed by molecular approaches",
Rice Genetics, IV. IRRI, Manila, Philippines
, 2001, pp. 89-105
Hass-B-L, Pires-J-C, Porter-R, Phillips-R-L, Jackson-S-A., "Comparative genetics at the gene and chromosome levels between rice (Oryza sativa) and wildrice (Zizania palustris)",
Theor. Appl. Genet.
, 2003, vol. 107, pp. 773-782
Images (0)
SNPs (0)