Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||
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Accession | GR:0020072 | ||||||||
Gene Symbol | KS6 | ||||||||
Gene Name | Ent-kaurene synthase 6 | ||||||||
Synonyms (8) |
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E.C. Numbers (0) | |||||||||
Pathway Reactions (0) | |||||||||
Chromosome No. | 2 | ||||||||
Gene Type | CDS (Protein coding) | ||||||||
Has Phenotype | |||||||||
Description | The gene encodes for the enzyme ent-isokaurene synthase. It catalyzes the conversion of ent-copalyl diphosphate (ent-CDP) into ent-isokaurene. It is the same reaction carried out by the O. sativa subsp. indica allele of the gene KS5 (GR:0020071). Gibberellin mutants are associated with dwarfism. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 21,880,441-21,893,361bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 2 | 21880441 bp | 21893361 bp | grjp2009a-2-GR:0020072 |
Trait | growth and development trait (TO:0000357), enzyme activity trait (TO:0000599) |
Plant Growth and Development Stage | whole plant development stage (PO:0007033), leaf production stage (PO:0007133), sporophyte vegetative stage (PO:0007134) |
Cereal Plant Growth Stage | rice growth stage (GRO:0007040), 02-seedling (GRO:0007047), A-vegetative stage (GRO:0007139) |
Cellular Component | plastid (GO:0009536) |
Molecular Function | ent-kaurene synthase activity (GO:0009899), ent-isokaurene synthase activity (GO:0034281) |
Biological Process | metabolic process (GO:0008152), gibberellin metabolic process (GO:0009685), diterpene phytoalexin metabolic process (GO:0051501) |
Environment | laboratory study (EO:0007255), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr2 | 21,880,441 | 21,893,361 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr2 | 21,880,441 | 21,893,361 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr2 | 21,880,441 | 21,893,361 | Huang X, et al, Nat Genetics 2010 Nov... | 42 | Search for SNPs |
chr2 | 21,880,441 | 21,893,361 | RiceDiversity 44K SNP assay, 34 trait... | 42 | Search for SNPs |
chr2 | 21,880,441 | 21,893,361 | RiceDiversity 44K SNP assay, 34 trait... | 0 |