Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
---|---|---|---|---|---|---|---|
Accession | GR:0020053 | ||||||
Gene Symbol | ckx4 | ||||||
Gene Name | Putative cytokinin dehydrogenase 4 | ||||||
Synonyms (4) |
|
||||||
E.C. Numbers (1) | 1.5.99.12 | ||||||
Pathway Reactions (6) |
|
||||||
Chromosome No. | 1 | ||||||
Gene Type | CDS (Protein coding) | ||||||
Has Phenotype | no | ||||||
Description | Cytokinin oxidase/dehydrogenase enzymes (CKX) are reponsible for the majority of cytokinin catabolism. | ||||||
Curator Comment | Members of the CKX family are posttranslationally modifies by glycosylation. In addition, CKX members contain the cofactor FAD. |
Protein |
|
||||||
---|---|---|---|---|---|---|---|
Nucleotide (DNA) |
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 41,299,160-41,302,001bp | View Comparative Map | |||
|
Map Position [ View in Marker DB ] | |||||
---|---|---|---|---|---|
# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 1 | 41299160 bp | 41302001 bp | grjp2009a-1-GR:0020053 |
Cellular Component | cytoplasmic membrane-bounded vesicle (GO:0016023), secretion by cell (GO:0032940) |
Molecular Function | oxidoreductase activity (GO:0016491), cytokinin dehydrogenase activity (GO:0019139) |
Biological Process | electron transport chain (GO:0022900) |
Environment | Magnaporthe grisea (EO:0007226), benzothiadiazole regimen (EO:0007267), watering regimen (EO:0007383), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr1 | 41,299,160 | 41,302,001 | ~160K SNPs x 20 accessions (McNally 2... | 4 | Search for SNPs |
chr1 | 41,299,160 | 41,302,001 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr1 | 41,299,160 | 41,302,001 | Huang X, et al, Nat Genetics 2010 Nov... | 7 | Search for SNPs |
chr1 | 41,299,160 | 41,302,001 | RiceDiversity 44K SNP assay, 34 trait... | 7 | Search for SNPs |
chr1 | 41,299,160 | 41,302,001 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |