grain_icon Diversity Home | Tools | SNP Query | Launch TASSEL | Download Data Sets | Tutorials | FAQ | Release Notes

Gramene: Genetic Diversity Database

Results for "cold."

Search again


Chr Start Stop Type Name Aliases Exp Num. SNP Positions  
chr2 11,389,704 12,216,613 QTL AQAV001 COLDTL, cold tolerance, qCTB2a ~160K SNPs x 20 accessions (McNally 2... 225 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV001 COLDTL, cold tolerance, qCTB2a '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr2 11,389,704 12,216,613 QTL AQAV001 COLDTL, cold tolerance, qCTB2a Huang X, et al, Nat Genetics 2010 Nov... 509 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV001 COLDTL, cold tolerance, qCTB2a RiceDiversity 44K SNP assay, 34 trait... 509 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV001 COLDTL, cold tolerance, qCTB2a RiceDiversity 44K SNP assay, 34 trait... 58 Search for SNPs
chr9 17,719,660 18,810,331 QTL AQAV002 COLDTL, cold tolerance, qCTB9 ~160K SNPs x 20 accessions (McNally 2... 624 Search for SNPs
chr9 17,719,660 18,810,331 QTL AQAV002 COLDTL, cold tolerance, qCTB9 '1536 chip' - 1311 SNPs x 395 rice ac... 5 Search for SNPs
chr9 17,719,660 18,810,331 QTL AQAV002 COLDTL, cold tolerance, qCTB9 Huang X, et al, Nat Genetics 2010 Nov... 2,013 Search for SNPs
chr9 17,719,660 18,810,331 QTL AQAV002 COLDTL, cold tolerance, qCTB9 RiceDiversity 44K SNP assay, 34 trait... 2,013 Search for SNPs
chr9 17,719,660 18,810,331 QTL AQAV002 COLDTL, cold tolerance, qCTB9 RiceDiversity 44K SNP assay, 34 trait... 135 Search for SNPs
chr1 5,558,576 7,445,919 QTL AQAV003 COLDTL, cold tolerance, qCTB1 ~160K SNPs x 20 accessions (McNally 2... 1,458 Search for SNPs
chr1 5,558,576 7,445,919 QTL AQAV003 COLDTL, cold tolerance, qCTB1 '1536 chip' - 1311 SNPs x 395 rice ac... 12 Search for SNPs
chr1 5,558,576 7,445,919 QTL AQAV003 COLDTL, cold tolerance, qCTB1 Huang X, et al, Nat Genetics 2010 Nov... 6,479 Search for SNPs
chr1 5,558,576 7,445,919 QTL AQAV003 COLDTL, cold tolerance, qCTB1 RiceDiversity 44K SNP assay, 34 trait... 6,479 Search for SNPs
chr1 5,558,576 7,445,919 QTL AQAV003 COLDTL, cold tolerance, qCTB1 RiceDiversity 44K SNP assay, 34 trait... 672 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV004 COLDTL, cold tolerance, qCTB2b ~160K SNPs x 20 accessions (McNally 2... 225 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV004 COLDTL, cold tolerance, qCTB2b '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr2 11,389,704 12,216,613 QTL AQAV004 COLDTL, cold tolerance, qCTB2b Huang X, et al, Nat Genetics 2010 Nov... 509 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV004 COLDTL, cold tolerance, qCTB2b RiceDiversity 44K SNP assay, 34 trait... 509 Search for SNPs
chr2 11,389,704 12,216,613 QTL AQAV004 COLDTL, cold tolerance, qCTB2b RiceDiversity 44K SNP assay, 34 trait... 58 Search for SNPs
chr5 27,342,022 27,342,124 QTL AQAV006 COLDTL, cold tolerance, qCTB5 ~160K SNPs x 20 accessions (McNally 2... 0  
chr5 27,342,022 27,342,124 QTL AQAV006 COLDTL, cold tolerance, qCTB5 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr5 27,342,022 27,342,124 QTL AQAV006 COLDTL, cold tolerance, qCTB5 Huang X, et al, Nat Genetics 2010 Nov... 0  
chr5 27,342,022 27,342,124 QTL AQAV006 COLDTL, cold tolerance, qCTB5 RiceDiversity 44K SNP assay, 34 trait... 0  
chr5 27,342,022 27,342,124 QTL AQAV006 COLDTL, cold tolerance, qCTB5 RiceDiversity 44K SNP assay, 34 trait... 0  
chr7 27,159,051 27,159,261 QTL AQBO001 COLDTL, cold tolerance, Cts ~160K SNPs x 20 accessions (McNally 2... 0  
chr7 27,159,051 27,159,261 QTL AQBO001 COLDTL, cold tolerance, Cts '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr7 27,159,051 27,159,261 QTL AQBO001 COLDTL, cold tolerance, Cts Huang X, et al, Nat Genetics 2010 Nov... 0  
chr7 27,159,051 27,159,261 QTL AQBO001 COLDTL, cold tolerance, Cts RiceDiversity 44K SNP assay, 34 trait... 0  
chr7 27,159,051 27,159,261 QTL AQBO001 COLDTL, cold tolerance, Cts RiceDiversity 44K SNP assay, 34 trait... 0  
chr4 30,772,388 32,650,528 QTL AQDU001 COLDTL, cold tolerance, qCTS4-2 ~160K SNPs x 20 accessions (McNally 2... 968 Search for SNPs
chr4 30,772,388 32,650,528 QTL AQDU001 COLDTL, cold tolerance, qCTS4-2 '1536 chip' - 1311 SNPs x 395 rice ac... 12 Search for SNPs
chr4 30,772,388 32,650,528 QTL AQDU001 COLDTL, cold tolerance, qCTS4-2 Huang X, et al, Nat Genetics 2010 Nov... 6,230 Search for SNPs
chr4 30,772,388 32,650,528 QTL AQDU001 COLDTL, cold tolerance, qCTS4-2 RiceDiversity 44K SNP assay, 34 trait... 6,230 Search for SNPs
chr4 30,772,388 32,650,528 QTL AQDU001 COLDTL, cold tolerance, qCTS4-2 RiceDiversity 44K SNP assay, 34 trait... 272 Search for SNPs
chr6 19,499,320 27,252,383 QTL AQDU002 COLDTL, cold tolerance, qCTS6-2 ~160K SNPs x 20 accessions (McNally 2... 4,983 Search for SNPs
chr6 19,499,320 27,252,383 QTL AQDU002 COLDTL, cold tolerance, qCTS6-2 '1536 chip' - 1311 SNPs x 395 rice ac... 30 Search for SNPs
chr6 19,499,320 27,252,383 QTL AQDU002 COLDTL, cold tolerance, qCTS6-2 Huang X, et al, Nat Genetics 2010 Nov... 14,403 Search for SNPs
chr6 19,499,320 27,252,383 QTL AQDU002 COLDTL, cold tolerance, qCTS6-2 RiceDiversity 44K SNP assay, 34 trait... 14,403 Search for SNPs
chr6 19,499,320 27,252,383 QTL AQDU002 COLDTL, cold tolerance, qCTS6-2 RiceDiversity 44K SNP assay, 34 trait... 884 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU003 COLDTL, cold tolerance, qCTS8-2a ~160K SNPs x 20 accessions (McNally 2... 203 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU003 COLDTL, cold tolerance, qCTS8-2a '1536 chip' - 1311 SNPs x 395 rice ac... 2 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU003 COLDTL, cold tolerance, qCTS8-2a Huang X, et al, Nat Genetics 2010 Nov... 1,160 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU003 COLDTL, cold tolerance, qCTS8-2a RiceDiversity 44K SNP assay, 34 trait... 1,160 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU003 COLDTL, cold tolerance, qCTS8-2a RiceDiversity 44K SNP assay, 34 trait... 66 Search for SNPs
chr11 932,068 932,221 QTL AQDU004 COLDTL, cold tolerance, qCTS11-1 ~160K SNPs x 20 accessions (McNally 2... 0  
chr11 932,068 932,221 QTL AQDU004 COLDTL, cold tolerance, qCTS11-1 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr11 932,068 932,221 QTL AQDU004 COLDTL, cold tolerance, qCTS11-1 Huang X, et al, Nat Genetics 2010 Nov... 0  
chr11 932,068 932,221 QTL AQDU004 COLDTL, cold tolerance, qCTS11-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr11 932,068 932,221 QTL AQDU004 COLDTL, cold tolerance, qCTS11-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr12 8,826,555 8,826,855 QTL AQDU005 COLDTL, cold tolerance, qCTS12a ~160K SNPs x 20 accessions (McNally 2... 0  
chr12 8,826,555 8,826,855 QTL AQDU005 COLDTL, cold tolerance, qCTS12a '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr12 8,826,555 8,826,855 QTL AQDU005 COLDTL, cold tolerance, qCTS12a B-Gross/J-Yulin SNP Pi-ta study in AA... 0  
chr12 8,826,555 8,826,855 QTL AQDU005 COLDTL, cold tolerance, qCTS12a Huang X, et al, Nat Genetics 2010 Nov... 0  
chr12 8,826,555 8,826,855 QTL AQDU005 COLDTL, cold tolerance, qCTS12a RiceDiversity 44K SNP assay, 34 trait... 0  
chr12 8,826,555 8,826,855 QTL AQDU005 COLDTL, cold tolerance, qCTS12a RiceDiversity 44K SNP assay, 34 trait... 0  
chr1 32,099,566 33,677,892 QTL AQDU006 COLDTL, cold tolerance, qCTS1 ~160K SNPs x 20 accessions (McNally 2... 1,296 Search for SNPs
chr1 32,099,566 33,677,892 QTL AQDU006 COLDTL, cold tolerance, qCTS1 '1536 chip' - 1311 SNPs x 395 rice ac... 8 Search for SNPs
chr1 32,099,566 33,677,892 QTL AQDU006 COLDTL, cold tolerance, qCTS1 Huang X, et al, Nat Genetics 2010 Nov... 3,749 Search for SNPs
chr1 32,099,566 33,677,892 QTL AQDU006 COLDTL, cold tolerance, qCTS1 RiceDiversity 44K SNP assay, 34 trait... 3,749 Search for SNPs
chr1 32,099,566 33,677,892 QTL AQDU006 COLDTL, cold tolerance, qCTS1 RiceDiversity 44K SNP assay, 34 trait... 258 Search for SNPs
chr4 688,353 6,574,518 QTL AQDU008 COLDTL, cold tolerance, qCTS4-1 ~160K SNPs x 20 accessions (McNally 2... 2,122 Search for SNPs
chr4 688,353 6,574,518 QTL AQDU008 COLDTL, cold tolerance, qCTS4-1 '1536 chip' - 1311 SNPs x 395 rice ac... 24 Search for SNPs
chr4 688,353 6,574,518 QTL AQDU008 COLDTL, cold tolerance, qCTS4-1 Huang X, et al, Nat Genetics 2010 Nov... 12,839 Search for SNPs
chr4 688,353 6,574,518 QTL AQDU008 COLDTL, cold tolerance, qCTS4-1 RiceDiversity 44K SNP assay, 34 trait... 12,839 Search for SNPs
chr4 688,353 6,574,518 QTL AQDU008 COLDTL, cold tolerance, qCTS4-1 RiceDiversity 44K SNP assay, 34 trait... 501 Search for SNPs
chr6 5,425,408 5,425,631 QTL AQDU009 COLDTL, cold tolerance, qCTS6-1 ~160K SNPs x 20 accessions (McNally 2... 1 Search for SNPs
chr6 5,425,408 5,425,631 QTL AQDU009 COLDTL, cold tolerance, qCTS6-1 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr6 5,425,408 5,425,631 QTL AQDU009 COLDTL, cold tolerance, qCTS6-1 Huang X, et al, Nat Genetics 2010 Nov... 1 Search for SNPs
chr6 5,425,408 5,425,631 QTL AQDU009 COLDTL, cold tolerance, qCTS6-1 RiceDiversity 44K SNP assay, 34 trait... 1 Search for SNPs
chr6 5,425,408 5,425,631 QTL AQDU009 COLDTL, cold tolerance, qCTS6-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr8 21,142,348 21,142,502 QTL AQDU010 COLDTL, cold tolerance, qCTS8-1 ~160K SNPs x 20 accessions (McNally 2... 0  
chr8 21,142,348 21,142,502 QTL AQDU010 COLDTL, cold tolerance, qCTS8-1 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr8 21,142,348 21,142,502 QTL AQDU010 COLDTL, cold tolerance, qCTS8-1 Huang X, et al, Nat Genetics 2010 Nov... 0  
chr8 21,142,348 21,142,502 QTL AQDU010 COLDTL, cold tolerance, qCTS8-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr8 21,142,348 21,142,502 QTL AQDU010 COLDTL, cold tolerance, qCTS8-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr8 20,650,060 21,142,502 QTL AQDU012 COLDTL, cold tolerance, qCTS8-2b ~160K SNPs x 20 accessions (McNally 2... 203 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU012 COLDTL, cold tolerance, qCTS8-2b '1536 chip' - 1311 SNPs x 395 rice ac... 2 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU012 COLDTL, cold tolerance, qCTS8-2b Huang X, et al, Nat Genetics 2010 Nov... 1,160 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU012 COLDTL, cold tolerance, qCTS8-2b RiceDiversity 44K SNP assay, 34 trait... 1,160 Search for SNPs
chr8 20,650,060 21,142,502 QTL AQDU012 COLDTL, cold tolerance, qCTS8-2b RiceDiversity 44K SNP assay, 34 trait... 66 Search for SNPs
chr11 25,153,466 25,153,681 QTL AQDU013 COLDTL, cold tolerance, qCTS11-2 ~160K SNPs x 20 accessions (McNally 2... 0  
chr11 25,153,466 25,153,681 QTL AQDU013 COLDTL, cold tolerance, qCTS11-2 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr11 25,153,466 25,153,681 QTL AQDU013 COLDTL, cold tolerance, qCTS11-2 Huang X, et al, Nat Genetics 2010 Nov... 0  
chr11 25,153,466 25,153,681 QTL AQDU013 COLDTL, cold tolerance, qCTS11-2 RiceDiversity 44K SNP assay, 34 trait... 0  
chr11 25,153,466 25,153,681 QTL AQDU013 COLDTL, cold tolerance, qCTS11-2 RiceDiversity 44K SNP assay, 34 trait... 0  
chr12 8,826,555 8,826,855 QTL AQDU014 COLDTL, cold tolerance, qCTS12b ~160K SNPs x 20 accessions (McNally 2... 0  
chr12 8,826,555 8,826,855 QTL AQDU014 COLDTL, cold tolerance, qCTS12b '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr12 8,826,555 8,826,855 QTL AQDU014 COLDTL, cold tolerance, qCTS12b B-Gross/J-Yulin SNP Pi-ta study in AA... 0  
chr12 8,826,555 8,826,855 QTL AQDU014 COLDTL, cold tolerance, qCTS12b Huang X, et al, Nat Genetics 2010 Nov... 0  
chr12 8,826,555 8,826,855 QTL AQDU014 COLDTL, cold tolerance, qCTS12b RiceDiversity 44K SNP assay, 34 trait... 0  
chr12 8,826,555 8,826,855 QTL AQDU014 COLDTL, cold tolerance, qCTS12b RiceDiversity 44K SNP assay, 34 trait... 0  
chr4 26,857,374 29,061,127 QTL AQDU015 COLDTL, cold tolerance, qCTS4-3 ~160K SNPs x 20 accessions (McNally 2... 898 Search for SNPs
chr4 26,857,374 29,061,127 QTL AQDU015 COLDTL, cold tolerance, qCTS4-3 '1536 chip' - 1311 SNPs x 395 rice ac... 6 Search for SNPs
chr4 26,857,374 29,061,127 QTL AQDU015 COLDTL, cold tolerance, qCTS4-3 Huang X, et al, Nat Genetics 2010 Nov... 3,923 Search for SNPs
chr4 26,857,374 29,061,127 QTL AQDU015 COLDTL, cold tolerance, qCTS4-3 RiceDiversity 44K SNP assay, 34 trait... 3,923 Search for SNPs
chr4 26,857,374 29,061,127 QTL AQDU015 COLDTL, cold tolerance, qCTS4-3 RiceDiversity 44K SNP assay, 34 trait... 188 Search for SNPs
chr8 19,051,713 22,886,866 QTL AQF129 COLDTL, cold tolerance, ~160K SNPs x 20 accessions (McNally 2... 1,481 Search for SNPs
chr8 19,051,713 22,886,866 QTL AQF129 COLDTL, cold tolerance, '1536 chip' - 1311 SNPs x 395 rice ac... 13 Search for SNPs
chr8 19,051,713 22,886,866 QTL AQF129 COLDTL, cold tolerance, Huang X, et al, Nat Genetics 2010 Nov... 7,062 Search for SNPs
chr8 19,051,713 22,886,866 QTL AQF129 COLDTL, cold tolerance, RiceDiversity 44K SNP assay, 34 trait... 7,062 Search for SNPs
chr8 19,051,713 22,886,866 QTL AQF129 COLDTL, cold tolerance, RiceDiversity 44K SNP assay, 34 trait... 394 Search for SNPs
chr8 21,142,348 21,142,502 QTL CQAA10 COLDTL, cold tolerance, qCTS8-1 ~160K SNPs x 20 accessions (McNally 2... 0  
chr8 21,142,348 21,142,502 QTL CQAA10 COLDTL, cold tolerance, qCTS8-1 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr8 21,142,348 21,142,502 QTL CQAA10 COLDTL, cold tolerance, qCTS8-1 Huang X, et al, Nat Genetics 2010 Nov... 0  
chr8 21,142,348 21,142,502 QTL CQAA10 COLDTL, cold tolerance, qCTS8-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr8 21,142,348 21,142,502 QTL CQAA10 COLDTL, cold tolerance, qCTS8-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr1 32,099,566 33,677,892 QTL CQAA6 COLDTL, cold tolerance, qCTS1 ~160K SNPs x 20 accessions (McNally 2... 1,296 Search for SNPs
chr1 32,099,566 33,677,892 QTL CQAA6 COLDTL, cold tolerance, qCTS1 '1536 chip' - 1311 SNPs x 395 rice ac... 8 Search for SNPs
chr1 32,099,566 33,677,892 QTL CQAA6 COLDTL, cold tolerance, qCTS1 Huang X, et al, Nat Genetics 2010 Nov... 3,749 Search for SNPs
chr1 32,099,566 33,677,892 QTL CQAA6 COLDTL, cold tolerance, qCTS1 RiceDiversity 44K SNP assay, 34 trait... 3,749 Search for SNPs
chr1 32,099,566 33,677,892 QTL CQAA6 COLDTL, cold tolerance, qCTS1 RiceDiversity 44K SNP assay, 34 trait... 258 Search for SNPs
chr4 688,353 6,574,518 QTL CQAA8 COLDTL, cold tolerance, qCTS4-1 ~160K SNPs x 20 accessions (McNally 2... 2,122 Search for SNPs
chr4 688,353 6,574,518 QTL CQAA8 COLDTL, cold tolerance, qCTS4-1 '1536 chip' - 1311 SNPs x 395 rice ac... 24 Search for SNPs
chr4 688,353 6,574,518 QTL CQAA8 COLDTL, cold tolerance, qCTS4-1 Huang X, et al, Nat Genetics 2010 Nov... 12,839 Search for SNPs
chr4 688,353 6,574,518 QTL CQAA8 COLDTL, cold tolerance, qCTS4-1 RiceDiversity 44K SNP assay, 34 trait... 12,839 Search for SNPs
chr4 688,353 6,574,518 QTL CQAA8 COLDTL, cold tolerance, qCTS4-1 RiceDiversity 44K SNP assay, 34 trait... 501 Search for SNPs
chr6 5,425,408 5,425,631 QTL CQAA9 COLDTL, cold tolerance, qCTS6-1 ~160K SNPs x 20 accessions (McNally 2... 1 Search for SNPs
chr6 5,425,408 5,425,631 QTL CQAA9 COLDTL, cold tolerance, qCTS6-1 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr6 5,425,408 5,425,631 QTL CQAA9 COLDTL, cold tolerance, qCTS6-1 Huang X, et al, Nat Genetics 2010 Nov... 1 Search for SNPs
chr6 5,425,408 5,425,631 QTL CQAA9 COLDTL, cold tolerance, qCTS6-1 RiceDiversity 44K SNP assay, 34 trait... 1 Search for SNPs
chr6 5,425,408 5,425,631 QTL CQAA9 COLDTL, cold tolerance, qCTS6-1 RiceDiversity 44K SNP assay, 34 trait... 0  
chr4 31,276,528 32,772,351 QTL CQO1 COLDTL, cold tolerance, ctb-1 ~160K SNPs x 20 accessions (McNally 2... 756 Search for SNPs
chr4 31,276,528 32,772,351 QTL CQO1 COLDTL, cold tolerance, ctb-1 '1536 chip' - 1311 SNPs x 395 rice ac... 10 Search for SNPs
chr4 31,276,528 32,772,351 QTL CQO1 COLDTL, cold tolerance, ctb-1 Huang X, et al, Nat Genetics 2010 Nov... 5,636 Search for SNPs
chr4 31,276,528 32,772,351 QTL CQO1 COLDTL, cold tolerance, ctb-1 RiceDiversity 44K SNP assay, 34 trait... 5,636 Search for SNPs
chr4 31,276,528 32,772,351 QTL CQO1 COLDTL, cold tolerance, ctb-1 RiceDiversity 44K SNP assay, 34 trait... 211 Search for SNPs
chr4 29,155,838 30,445,683 QTL CQO3 COLDTL, cold tolerance, ctb-2 ~160K SNPs x 20 accessions (McNally 2... 642 Search for SNPs
chr4 29,155,838 30,445,683 QTL CQO3 COLDTL, cold tolerance, ctb-2 '1536 chip' - 1311 SNPs x 395 rice ac... 4 Search for SNPs
chr4 29,155,838 30,445,683 QTL CQO3 COLDTL, cold tolerance, ctb-2 Huang X, et al, Nat Genetics 2010 Nov... 2,870 Search for SNPs
chr4 29,155,838 30,445,683 QTL CQO3 COLDTL, cold tolerance, ctb-2 RiceDiversity 44K SNP assay, 34 trait... 2,870 Search for SNPs
chr4 29,155,838 30,445,683 QTL CQO3 COLDTL, cold tolerance, ctb-2 RiceDiversity 44K SNP assay, 34 trait... 144 Search for SNPs
chr1 34,651,088 39,949,610 QTL CQP1 COLDTL, cold tolerance, qCT-1 ~160K SNPs x 20 accessions (McNally 2... 3,777 Search for SNPs
chr1 34,651,088 39,949,610 QTL CQP1 COLDTL, cold tolerance, qCT-1 '1536 chip' - 1311 SNPs x 395 rice ac... 18 Search for SNPs
chr1 34,651,088 39,949,610 QTL CQP1 COLDTL, cold tolerance, qCT-1 Huang X, et al, Nat Genetics 2010 Nov... 7,336 Search for SNPs
chr1 34,651,088 39,949,610 QTL CQP1 COLDTL, cold tolerance, qCT-1 RiceDiversity 44K SNP assay, 34 trait... 7,336 Search for SNPs
chr1 34,651,088 39,949,610 QTL CQP1 COLDTL, cold tolerance, qCT-1 RiceDiversity 44K SNP assay, 34 trait... 703 Search for SNPs
chr7 22,857,717 22,885,543 QTL CQP7 COLDTL, cold tolerance, qCT-7 ~160K SNPs x 20 accessions (McNally 2... 15 Search for SNPs
chr7 22,857,717 22,885,543 QTL CQP7 COLDTL, cold tolerance, qCT-7 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr7 22,857,717 22,885,543 QTL CQP7 COLDTL, cold tolerance, qCT-7 Huang X, et al, Nat Genetics 2010 Nov... 89 Search for SNPs
chr7 22,857,717 22,885,543 QTL CQP7 COLDTL, cold tolerance, qCT-7 RiceDiversity 44K SNP assay, 34 trait... 89 Search for SNPs
chr7 22,857,717 22,885,543 QTL CQP7 COLDTL, cold tolerance, qCT-7 RiceDiversity 44K SNP assay, 34 trait... 7 Search for SNPs
chr11 1,491,600 2,523,808 QTL CQP8 COLDTL, cold tolerance, qCT-11 ~160K SNPs x 20 accessions (McNally 2... 359 Search for SNPs
chr11 1,491,600 2,523,808 QTL CQP8 COLDTL, cold tolerance, qCT-11 '1536 chip' - 1311 SNPs x 395 rice ac... 3 Search for SNPs
chr11 1,491,600 2,523,808 QTL CQP8 COLDTL, cold tolerance, qCT-11 Huang X, et al, Nat Genetics 2010 Nov... 1,987 Search for SNPs
chr11 1,491,600 2,523,808 QTL CQP8 COLDTL, cold tolerance, qCT-11 RiceDiversity 44K SNP assay, 34 trait... 1,987 Search for SNPs
chr11 1,491,600 2,523,808 QTL CQP8 COLDTL, cold tolerance, qCT-11 RiceDiversity 44K SNP assay, 34 trait... 66 Search for SNPs
chr1 208,771 213,229 Gene GR:0101269 Cold inducible, COIN, The...
show tolerance to cold temperature, salt (NaCl)...
is induced by cold temperature, salt (NaCl		 ~160K SNPs x 20 accessions (McNally 2... 7 Search for SNPs
chr1 208,771 213,229 Gene GR:0101269 Cold inducible, COIN, The...
show tolerance to cold temperature, salt (NaCl)...
is induced by cold temperature, salt (NaCl		 '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr1 208,771 213,229 Gene GR:0101269 Cold inducible, COIN, The...
show tolerance to cold temperature, salt (NaCl)...
is induced by cold temperature, salt (NaCl		 Huang X, et al, Nat Genetics 2010 Nov... 13 Search for SNPs
chr1 208,771 213,229 Gene GR:0101269 Cold inducible, COIN, The...
show tolerance to cold temperature, salt (NaCl)...
is induced by cold temperature, salt (NaCl		 RiceDiversity 44K SNP assay, 34 trait... 13 Search for SNPs
chr1 208,771 213,229 Gene GR:0101269 Cold inducible, COIN, The...
show tolerance to cold temperature, salt (NaCl)...
is induced by cold temperature, salt (NaCl		 RiceDiversity 44K SNP assay, 34 trait... 2 Search for SNPs
chr1 208,771 213,229 Gene LOC_Os01g01420 ...e to cold response to water depri ~160K SNPs x 20 accessions (McNally 2... 7 Search for SNPs
chr1 208,771 213,229 Gene LOC_Os01g01420 ...e to cold response to water depri '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr1 208,771 213,229 Gene LOC_Os01g01420 ...e to cold response to water depri Huang X, et al, Nat Genetics 2010 Nov... 13 Search for SNPs
chr1 208,771 213,229 Gene LOC_Os01g01420 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 13 Search for SNPs
chr1 208,771 213,229 Gene LOC_Os01g01420 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 2 Search for SNPs
chr1 37,173,504 37,175,507 Gene LOC_Os01g64000 ...e to cold response to water depri ~160K SNPs x 20 accessions (McNally 2... 7 Search for SNPs
chr1 37,173,504 37,175,507 Gene LOC_Os01g64000 ...e to cold response to water depri '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr1 37,173,504 37,175,507 Gene LOC_Os01g64000 ...e to cold response to water depri Huang X, et al, Nat Genetics 2010 Nov... 1 Search for SNPs
chr1 37,173,504 37,175,507 Gene LOC_Os01g64000 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 1 Search for SNPs
chr1 37,173,504 37,175,507 Gene LOC_Os01g64000 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 3 Search for SNPs
chr2 34,217,248 34,221,752 Gene LOC_Os02g55910 ...e to cold response to water depri ~160K SNPs x 20 accessions (McNally 2... 2 Search for SNPs
chr2 34,217,248 34,221,752 Gene LOC_Os02g55910 ...e to cold response to water depri '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr2 34,217,248 34,221,752 Gene LOC_Os02g55910 ...e to cold response to water depri Huang X, et al, Nat Genetics 2010 Nov... 1 Search for SNPs
chr2 34,217,248 34,221,752 Gene LOC_Os02g55910 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 1 Search for SNPs
chr2 34,217,248 34,221,752 Gene LOC_Os02g55910 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 0  
chr5 2,219,876 2,220,437 Gene LOC_Os05g04700 ...e to cold response to water depri ~160K SNPs x 20 accessions (McNally 2... 0  
chr5 2,219,876 2,220,437 Gene LOC_Os05g04700 ...e to cold response to water depri '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr5 2,219,876 2,220,437 Gene LOC_Os05g04700 ...e to cold response to water depri Huang X, et al, Nat Genetics 2010 Nov... 0  
chr5 2,219,876 2,220,437 Gene LOC_Os05g04700 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 0  
chr5 2,219,876 2,220,437 Gene LOC_Os05g04700 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 0  
chr7 26,402,680 26,403,735 Gene LOC_Os07g44180 ...e to cold response to water depri ~160K SNPs x 20 accessions (McNally 2... 1 Search for SNPs
chr7 26,402,680 26,403,735 Gene LOC_Os07g44180 ...e to cold response to water depri '1536 chip' - 1311 SNPs x 395 rice ac... 0  
chr7 26,402,680 26,403,735 Gene LOC_Os07g44180 ...e to cold response to water depri Huang X, et al, Nat Genetics 2010 Nov... 0  
chr7 26,402,680 26,403,735 Gene LOC_Os07g44180 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 0  
chr7 26,402,680 26,403,735 Gene LOC_Os07g44180 ...e to cold response to water depri RiceDiversity 44K SNP assay, 34 trait... 1 Search for SNPs