Oryza sativa Germplasm "Agostano"
| Accession Name | Agostano |
|---|---|
| Institute(s) Holding Accession | |
| Accession Number | PI400344 |
| Synonym(s) | |
| Germplasm Type | N/A |
| Genus | Oryza |
| Species | sativa |
| Subspecies | |
| Subtaxa | |
| Taxonomy Cross-Reference | GR_tax:013681 |
Experiments (2)
| Title | Design | Polymorphism Type | Allele Scoring Protocol | PI(s) | Comments | Data |
|---|---|---|---|---|---|---|
| Genetic structure and diversity in Oryza sativa L. | 234 rice accessions from wide geographical regions of the world genotyped at 169 nuclear and 2 chloroplast loci to elucidate diversity within subspecies Oryza sativa indica and japonica | N/A | McCouch-S-R, Tai-T-H | Prediction of population structure was model-based (STRUCTURE) and based on data from 169 genomic SSRs. Reference: Garris et al., 2005. | Show Allele Data | |
| Global dissemination of a single mutation conferring white pericarp in rice | Genotyping of 440 geographically and genetically diverse rice cultivars using the rice indel RID 12 primers | N/A | Sweeney/McCouch | Reference: Sweeney et. al. PLoS Genetics, 2007; Genotyping analysis revealed a single 14-bp deletion in the Rc gene is responsible for white pericarp in 97.9% of rice | Show Allele Data |
Related Stocks (2)
| Stock Source | Seed Lot ID | Comments |
|---|---|---|
| NSGC | RA5360 | |
| McCouch Lab | RA5360 | new as of Sweeney et. al. PMID:17696613 |
Traits (1)
| Trait id | value | exp id |
|---|---|---|
| 19461 | white | 20 |
Traits UOM (1)
| Trait Name | Trait Protocol | LINK TO TRAIT VALUES |
|---|---|---|
| pericarp color | Ten seeds per plant were dehulled and then visually inspected; PATO:0000322, PATO:0000323; ECO:0000002; GAZ:00004426 |
Collection Information
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Locality
| Country | |
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| ISO3166 Country Code | |
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| Gazetteer Ontology | N/A |
| Elevation | |
| Latitude | NA |
| Longitude | NA |
| Map |