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Sequence and assembly

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  • Contigs
    Track showing underlying assembly contigs.
  • Sequence
    Track showing sequence in both directions. Only displayed at 1Kb and below.
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    Genes and transcripts

    • Non-coding RNA genes annotated in ENA
      This track comprises multiple analyses; Non-coding RNA genes annotated in ENA; Protein coding genes annotated in ENA

    mRNA and protein alignments

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    • EST Cluster (Arabidopsis)
      Alignments of EST clusters (Unigenes, Gene Indices) from Arabidopsis
    • EST Cluster (Maize)
      Alignments of EST clusters (Unigenes, Gene Indices) from Maize
    • EST Cluster (Rice)
      Alignments of EST clusters (Unigenes, Gene Indices) from rice (Oryza) species
    • EST Cluster (Selaginella)
      Alignments of EST clusters (Unigenes, Gene Indices) from Selaginella species
    • Selaginella EST
      Genomic alignments of Selaginella "Expressed Sequence Tags" (ESTs) from dbEST

    Comparative genomics

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      Repeat regions

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        Information and decorations

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        • %GC
          Shows percentage of Gs & Cs in region
        • Scale bar
          Shows the scalebar
        • Ruler
          Shows the length of the region being displayed
        • Alignment Difference Legend
        • Gene Legend
        • Disabled track summary
          Show counts of number of tracks turned off by the user
        • Information
          Details of the region shown in the image
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