Current Release BGI-2005

Assembly

This release is based on BGI assembly of Beijing indica sequence contigs, for more information, go to BGI website .

Annotation

• Feature data sets mapped to the genome can be viewed in summary and detailed form.
• Putative orthologs between Indian rice, Japanese rice, Arabidopsis and maize gene models were generated using Ensembl's Compara pipeline.

Entry Points

Browse by Chromosome

Lookup a Chromosome Location

Example Features

	Gene:	NP_001041921.1
	Transcript:	BGIOSIBCE027421
	Scaffold:	Scaffold000106

Statistics

Assembly:	Jan_2005,
Genebuild:	BGI, Jan 2005
Database version:	49.bgi2005
Known protein-coding genes:	29,047
Novel protein-coding genes:	9,814
Gene exons:	165,890
Gene transcripts:	38,861
Base Pairs:	411,710,190
Golden Path Length:	427,004,890
Most common InterPro domains:	Top 40 Top 500

How the statistics are calculated