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Protein domains

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  • OnPIRSF domain
    Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.
  • OnPROSITE patterns
    Protein domains and motifs from the PROSITE profiles database are aligned to the genome.
  • OnPfam domain
    Protein domains and motifs in the Pfam database.
  • OnPrints domain
    Protein fingerprints (groups of conserved motifs) are aligned to the genome. These motifs come from the PRINTS database.
  • OnSMART domain
    Protein domains and motifs in the SMART database.
  • OnSuperfamily domain
    Protein domains and motifs in the SUPERFAMILY database.
  • OnTIGRFAM domain
    Protein domains and motifs in the TIGRFAM database.

Protein features

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  • OnCleavage site (Signalp)
    Prediction of signal peptide cleavage sites by SignalP.
  • OnCoiled-coils (Ncoils)
    Prediction of coiled-coil regions in proteins is by Ncoils.
  • OnLow complexity (Seg)
    Identification of peptide low complexity sequences by Seg.
  • OnTransmembrane helices
    Prediction of transmembrane helices in proteins by TMHMM.

Variation

  • CompactSequence variants (all sources)
    Sequence variants from all sources

Information and decorations

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  • OnScale bar
  • OnVariation Legend
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