Active tracks

Search results

Favourite tracks

Sequence and assembly

Enable/disable all tracks
  • OnContigs
    Track showing underlying assembly contigs.
  • OnSequence
    Track showing sequence in both directions. Only displayed at 1Kb and below.

Genes and transcripts

Genes

  • Expanded with labelsMIPS/JGI Genes
    Gene annotation by MIPS and JGI through a process of automatic and manual curation

Prediction transcripts

Wheat SNPs and alignments

Enable/disable all tracks

    mRNA and protein alignments

    Enable/disable all mRNA alignments
    • StackedEST Cluster (Arabidopsis)
      Alignments of EST clusters (Unigenes, Gene Indices) from Arabidopsis
    • StackedEST Cluster (Brachypodium)
      Alignments of EST clusters (Unigenes, Gene Indices) from Brachypodium species
    • StackedEST Cluster (Dicot)
      Alignmments of EST clusters (Unigenes, Gene Indices) from all dicot species
    • StackedEST Cluster (Maize)
      Alignments of EST clusters (Unigenes, Gene Indices) from Maize
    • StackedEST Cluster (Monocot)
      Alignments of EST clusters (Unigenes, Gene Indices) from monocot species
    • StackedEST Cluster (Rice)
      Alignments of EST clusters (Unigenes, Gene Indices) from rice (Oryza) species

    EST alignments

      Variation

      Enable/disable all tracks

        Somatic mutations

          Comparative genomics

          Multiple alignments

            Enable/disable all BLASTz/LASTz alignments

              Repeat regions

              Enable/disable all tracks

                Information and decorations

                Enable/disable all tracks
                • On%GC
                  Shows percentage of Gs & Cs in region
                • OnScale bar
                  Shows the scalebar
                • OnRuler
                  Shows the length of the region being displayed
                • OnVariation Legend
                • OnAlignment Difference Legend
                • OnGene Legend
                • OnDisabled track summary
                  Show counts of number of tracks turned off by the user
                • OnInformation
                  Details of the region shown in the image
                You have no favourite tracks. Use the star icon to add tracks to your favourites

                Track order

                  Display options

                  close

                  Save configuration

                  Or