Active tracks

Search results

Favourite tracks

Sequence and assembly

Enable/disable all tracks
  • Contigs
    Track showing underlying assembly contigs.
  • Sequence
    Track showing sequence in both directions. Only displayed at 1Kb and below.

Genes and transcripts

Genes

  • JGI Genes
    Gene annotation by JGI through a process of automatic and manual curation

Prediction transcripts

mRNA and protein alignments

Enable/disable all tracks
  • EST Cluster (Arabidopsis)
    Alignments of EST clusters (Unigenes, Gene Indices) from Arabidopsis
  • EST Cluster (Dicot)
    Alignmments of EST clusters (Unigenes, Gene Indices) from all dicot species
  • EST Cluster (Maize)
    Alignments of EST clusters (Unigenes, Gene Indices) from Maize
  • EST Cluster (Monocot)
    Alignments of EST clusters (Unigenes, Gene Indices) from monocot species
  • EST Cluster (Rice)
    Alignments of EST clusters (Unigenes, Gene Indices) from rice (Oryza) species

Comparative genomics

Enable/disable all tracks

    Repeat regions

    Enable/disable all tracks

      Information and decorations

      Enable/disable all tracks
      • %GC
        Shows percentage of Gs & Cs in region
      • Scale bar
        Shows the scalebar
      • Ruler
        Shows the length of the region being displayed
      • Alignment Difference Legend
      • Gene Legend
      • Disabled track summary
        Show counts of number of tracks turned off by the user
      • Information
        Details of the region shown in the image
      You have no favourite tracks. Use the star icon to add tracks to your favourites

      Track order

        Display options

        close

        Save configuration

        Or